# MMLSUM Exp_Change = 0.1 log odds matrix (in 1/4-bit units)
# Default Gap-open  = 32
# Default Gap-extn  = 5
# Notes: Matrix derived from MMLSUM (t = 11) Markov Matrix
# File generated on: 2020/10/02 12:50:15
     A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V   
A   14 -14 -16 -18 -11 -11 -12 -11 -16 -16 -13 -13 -12 -17 -12  -7 -12 -18 -16 -10
R  -14  17 -12 -15 -18  -7 -11 -18  -9 -18 -16  -4 -14 -21 -17 -13 -14 -15 -13 -20
N  -16 -12  18  -6 -18 -10 -12 -11  -9 -20 -23  -9 -17 -21 -15  -8 -11 -22 -13 -21
D  -18 -15  -6  16 -25 -12  -6 -13 -14 -29 -26 -12 -24 -25 -15 -10 -13 -23 -21 -31
C  -11 -18 -18 -25  24 -23 -31 -21 -17 -15 -13 -26 -13 -13 -24 -11 -15 -16 -15 -12
Q  -11  -7 -10 -12 -23  18  -5 -18  -8 -21 -16  -6 -10 -21 -14 -10 -11 -19 -14 -17
E  -12 -11 -12  -6 -31  -5  16 -19 -13 -23 -21  -8 -17 -25 -14 -12 -12 -23 -18 -18
G  -11 -18 -11 -13 -21 -18 -19  15 -17 -26 -24 -17 -20 -20 -16 -11 -17 -22 -22 -24
H  -16  -9  -9 -14 -17  -8 -13 -17  21 -21 -17 -12 -16 -14 -17 -13 -15 -14  -7 -19
I  -16 -18 -20 -29 -15 -21 -23 -26 -21  15  -6 -18  -7 -10 -19 -19 -14 -17 -18  -3
L  -13 -16 -23 -26 -13 -16 -21 -24 -17  -6  13 -19  -4  -8 -20 -21 -16 -14 -15  -9
K  -13  -4  -9 -12 -26  -6  -8 -17 -12 -18 -19  16 -14 -25 -13 -12 -11 -23 -18 -21
M  -12 -14 -17 -24 -13 -10 -17 -20 -16  -7  -4 -14  21  -9 -22 -14 -13 -12 -12 -11
F  -17 -21 -21 -25 -13 -21 -25 -20 -14 -10  -8 -25  -9  18 -19 -18 -17  -8  -4 -12
P  -12 -17 -15 -15 -24 -14 -14 -16 -17 -19 -20 -13 -22 -19  18 -12 -14 -22 -19 -16
S   -7 -13  -8 -10 -11 -10 -12 -11 -13 -19 -21 -12 -14 -18 -12  15  -5 -19 -16 -18
T  -12 -14 -11 -13 -15 -11 -12 -17 -15 -14 -16 -11 -13 -17 -14  -5  16 -17 -15 -10
W  -18 -15 -22 -23 -16 -19 -23 -22 -14 -17 -14 -23 -12  -8 -22 -19 -17  23  -6 -20
Y  -16 -13 -13 -21 -15 -14 -18 -22  -7 -18 -15 -18 -12  -4 -19 -16 -15  -6  18 -15
V  -10 -20 -21 -31 -12 -17 -18 -24 -19  -3  -9 -21 -11 -12 -16 -18 -10 -20 -15  14