# MMLSUM Exp_Change = 0.6 log odds matrix (in 1/4-bit units)
# Default Gap-open  = 22
# Default Gap-extn  = 3
# Notes: Matrix derived from MMLSUM (t = 101) Markov Matrix
# File generated on: 2020/10/02 12:50:15
     A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V   
A    9  -3  -4  -5  -1  -2  -2  -1  -4  -3  -3  -2  -2  -5  -2   1  -1  -6  -5  -1
R   -3  12  -1  -3  -6   2   0  -6   0  -6  -5   4  -4  -7  -4  -2  -3  -5  -3  -7
N   -4  -1  12   3  -6   0  -1  -1   0  -8  -9   0  -6  -8  -3   1  -1  -8  -3  -8
D   -5  -3   3  12 -10  -1   3  -2  -3 -12 -11  -1  -9 -11  -3  -1  -2 -10  -7 -11
C   -1  -6  -6 -10  20  -8 -10  -8  -5  -3  -2  -9  -2  -2  -9  -2  -3  -5  -3  -2
Q   -2   2   0  -1  -8  12   3  -5   1  -7  -5   2  -2  -7  -3  -1  -1  -7  -4  -6
E   -2   0  -1   3 -10   3  11  -6  -2  -9  -8   1  -6 -10  -3  -1  -2  -9  -6  -7
G   -1  -6  -1  -2  -8  -5  -6  12  -5 -11 -10  -5  -8  -8  -4  -1  -4  -9  -8  -9
H   -4   0   0  -3  -5   1  -2  -5  16  -7  -6  -1  -5  -3  -5  -2  -3  -3   2  -7
I   -3  -6  -8 -12  -3  -7  -9 -11  -7  10   3  -7   2   0  -7  -6  -3  -5  -4   5
L   -3  -5  -9 -11  -2  -5  -8 -10  -6   3   9  -7   4   2  -7  -7  -5  -3  -3   1
K   -2   4   0  -1  -9   2   1  -5  -1  -7  -7  11  -4  -9  -2  -1  -1  -9  -6  -7
M   -2  -4  -6  -9  -2  -2  -6  -8  -5   2   4  -4  14   0  -8  -4  -3  -2  -2   0
F   -5  -7  -8 -11  -2  -7 -10  -8  -3   0   2  -9   0  13  -7  -6  -5   2   5  -1
P   -2  -4  -3  -3  -9  -3  -3  -4  -5  -7  -7  -2  -8  -7  15  -2  -3  -9  -6  -5
S    1  -2   1  -1  -2  -1  -1  -1  -2  -6  -7  -1  -4  -6  -2   9   3  -7  -5  -5
T   -1  -3  -1  -2  -3  -1  -2  -4  -3  -3  -5  -1  -3  -5  -3   3  10  -6  -4  -1
W   -6  -5  -8 -10  -5  -7  -9  -9  -3  -5  -3  -9  -2   2  -9  -7  -6  20   4  -6
Y   -5  -3  -3  -7  -3  -4  -6  -8   2  -4  -3  -6  -2   5  -6  -5  -4   4  14  -4
V   -1  -7  -8 -11  -2  -6  -7  -9  -7   5   1  -7   0  -1  -5  -5  -1  -6  -4   9