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# Program: MUSTANG v0.2: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, P. J. Stuckey, J. C. Whisstock, and A. M. Lesk
# Rundate: Tue Oct  4 13:56:04 2005
# Report_file: results.html
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#====================================
# Aligned_structures: 11
#   1: 1HHOA.pdb
#   2: 2DHBA.pdb
#   3: 1HHOB.pdb
#   4: 2DHBB.pdb
#   5: 1MBD.pdb
#   6: 1ECO.pdb
#   7: 2LH7.pdb
#   8: 4VHB.pdb
#   9: 1DLW.pdb
#  10: 1DLY.pdb
#  11: 1IDR.pdb
#
# Length:        197
# Identity:        2/197 (  1.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      2/197 (  1.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          103/197 ( 52.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1HHOA.pdb               1  --VLSPADK------------TNVKAAWGKV-GAHAGEYGAEALERMFLSFPTTKTYF--   43
2DHBA.pdb               1  --VLSAADK------------TNVKAAWSKV-GGHAGEYGAEALERMFLGFPTTKTYF--   43
1HHOB.pdb               1  -VHLTPEEK------------SAVTALWGKV---NVDEVGGEALGRLLVVYPWTQRFF--   42
2DHBB.pdb               1  -VQLSGEEK------------AAVLALWDKV---NEEEVGGEALGRLLVVYPWTQRFF--   42
1MBD.pdb                1  --VLSEGEW------------QLVLHVWAKV-EADVAGHGQDILIRLFKSHPETLEKF--   43
1ECO.pdb                1  ---LSADQI------------STVQASFDKV-K-G---DPVGILYAVFKADPSIMAKF--   38
2LH7.pdb                1  G-ALTESQA------------ALVKSSWEEF-NANIPKHTHRFFILVLEIAPAAKDLF--   44
4VHB.pdb                1  --MLDQQTI------------NIIKATVPVL-KEHGVTITTTFYKNLFAKHPEVRPLFEQ   45
1DLW.pdb                1  ---------------------SLFEQL-G--GQAAVQAVTAQFYANIQADA-TVATFF--   33
1DLY.pdb                1  ---------------------SLFAKL-G--GREAVEAAVDKFYNKIVADP-TVSTYF--   33
1IDR.pdb                1  ---------GLLSRLRKREPISIYDKI-G--GHEAIEVVVEDFYVRVLADD-QLSAFF--   45
                                                                                    F  

1HHOA.pdb              44  PHF--D-L-----SHGSAQVKGHGKKVADALTNAVAHVD--D-----M------PNALS-   81
2DHBA.pdb              44  PHF--D-L-----SHGSAQVKAHGKKVADGLTLAVGHLD--D-----L------PGALS-   81
1HHOB.pdb              43  ESF--GDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLD--N-----L------KGTFA-   86
2DHBB.pdb              43  DSF--GDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLD--N-----L------KGTFA-   86
1MBD.pdb               44  DRF--KHLKTEAEMKASEDLKKHGVTVLTALGAILKKKG--H-----H------EAELK-   87
1ECO.pdb               39  TQFAG---KDLESIKGTAPFETHANRIVGFFSKIIGELP--N-----I------EADVN-   81
2LH7.pdb               45  SFL--KG-TSE-VPQNNPELQAHAGKVFKLVYEAAIQL-E-V------TGVVVTDATLK-   91
4VHB.pdb               46  -----------------------PKALAMTVLAAAQNIE--NLP--AI------LPAVK-   71
1DLW.pdb               34  NGI---------------DMPNQTNKTAAFLCAALG----GP--NAW------------T   60
1DLY.pdb               34  SNT---------------DMKVQRSKQFAFLAYALG----GA--SEW------------K   60
1IDR.pdb               46  SGT---------------NMSRLKGKQVEFFAAALG----GP--EPY------------T   72
                                                                                       

1HHOA.pdb              82  --ALSDLHAHKL--RVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLT  137
2DHBA.pdb              82  --DLSNLHAHKL--RVDPVNFKLLSHCLLSTLAVHLPNDFTPAVHASLDKFLSSVSTVLT  137
1HHOB.pdb              87  --TLSELHCDKL--HVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALA  142
2DHBB.pdb              87  --ALSELHCDKL--HVDPENFRLLGNVLALVVARHFGKDFTPELQASYQKVVAGVANALA  142
1MBD.pdb               88  --PLAQSHATKH--KIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIA  143
1ECO.pdb               82  --TFVASHK-PR--GVTHDQLNNFRAGFVSYMKAHT---DFAGAEAAWGATLDTFFGMIF  133
2LH7.pdb               92  --NLGSVHV-SK--GVADAHFPVVKEAILKTIKEVVGAKWSEELNSAWTIAYDELAIVIK  146
4VHB.pdb               72  --KIAVKHC-QA--GVAAAHYPIVGQELLGAIKEVLGDAATDDILDAWGKAYGVIADVFI  126
1DLW.pdb               61  GRNLKEVHA-NM--GVSNAQFTTVIGHLRSALTGAG---VAAALVEQTVAVAETVRGDVV  114
1DLY.pdb               61  GKDMRTAHK-DLVPHLSDVHFQAVARHLSDTLTELG---VPPEDITDAMAVVASTRTEVL  116
1IDR.pdb               73  GAPMKQVHQ-GR--GITMHHFSLVAGHLADALTAAG---VPSETITEILGVIAPLAVDVT  126
                                  H                                                    

1HHOA.pdb             138  SKYR-------------  141
2DHBA.pdb             138  SKYR-------------  141
1HHOB.pdb             143  HKYH-------------  146
2DHBB.pdb             143  HKYH-------------  146
1MBD.pdb              144  AKYKELGYQG-------  153
1ECO.pdb              134  SKM--------------  136
2LH7.pdb              147  KEMDDAA----------  153
4VHB.pdb              127  QVEADLYA--QAVE---  138
1DLW.pdb              115  TV---------------  116
1DLY.pdb              117  NM------------PQQ  121
1IDR.pdb              127  S----------------  127
                                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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