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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 00:19:57 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ACPS.html
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#====================================
# Aligned_structures: 3
#   1: 1f7la.pdb
#   2: 1qr0a1.pdb
#   3: 1qr0a2.pdb
#
# Length:        138
# Identity:        3/138 (  2.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     33/138 ( 23.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           51/138 ( 37.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1f7la.pdb               1  GIYGI-GLDITELKRIASMAGRQK---RF---AERILTRSELDQYYELS-EKRKNEFLAG   52
1qr0a1.pdb              1  ----MKIYGIYMDRP---------LSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLG   47
1qr0a2.pdb              1  ------GIDIEKTKP---------ISLEI---AKRFFSKTEYSDLLAKD-KDEQTDYFYH   41
                                 g dI   kp            e    a rf s  e         k      l g

1f7la.pdb              53  RFAAKEAFSKAFGTG-IGRQLSFQDI-EIRKD-Q--NGKPYIICTKLSP-A-AVHVSIT-  104
1qr0a1.pdb             48  DVLVRSVISRQYQ-------LDKSDI-RFSTQ-E--YGKPCIPD-----LP-DAHFNIS-   89
1qr0a2.pdb             42  LWSMKESFIKQEGKGL---SLP-LDSF-SVRLHQDG---QVSIELPD--SHSPCYIKTYE   91
                               ke fskq g       L   Di       q     p ii           h  i  

1f7la.pdb             105  HTKEYAAAQVVIER----  118
1qr0a1.pdb             90  HSGRWVIGAFDSQ-P--I  104
1qr0a2.pdb             92  VDPGYKMAVCAAH-PDF-  107
                           h   y  a          


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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