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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 01:07:39 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/B_lectin.html
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#====================================
# Aligned_structures: 3
#   1: 1bwud.pdb
#   2: 1jpc.pdb
#   3: 1npla.pdb
#
# Length:        110
# Identity:       49/110 ( 44.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     96/110 ( 87.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            2/110 (  1.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bwud.pdb               1  RNILTNDEGLYGGQSLDVNPYHLIMQEDCNLVLYDHSTAVWSSNTDIPGKKGCKAVLQSD   60
1jpc.pdb                1  DNILYSGETLSTGEFLNYGSFVFIMQEDCNLVLYDVDKPIWATNTGG-LSRSCFLSMQTD   59
1npla.pdb               1  DNILYSGETLSPGEFLNNGRYVFIMQEDCNLVLYDVDKPIWATNTGG-LDRRCHLSMQSD   59
                           dNILysgEtLs GefLn g yvfIMQEDCNLVLYDvdkpiWatNTgg l r C lsmQsD

1bwud.pdb              61  GNFVVYDAEGASLWASHSVRGNGNYVLVLQEDGNVVIYRSDIWSTNTYR-  109
1jpc.pdb               60  GNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTDRWATGTHT-  108
1npla.pdb              60  GNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGTARWATGTNIH  109
                           GNlVVY p n piWASntgg NGNYVcvLQkDrNVVIYgtdrWaTgT   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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