################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:06:58 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/CN_hydrolase.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1emsa.pdb
#   2: 1fo6a.pdb
#
# Length:        315
# Identity:       56/315 ( 17.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     56/315 ( 17.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           57/315 ( 18.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1emsa.pdb               1  MATGRHFIAVCQMT-SD--NDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFI------G   51
1fo6a.pdb               1  ---RQMILAVGQQGPIARAETREQVVGRLLDMLTNAASRGVNFIVFPELALTTFFPRWHF   57
                                   AV Q          E        M   A          PE            

1emsa.pdb              52  LNKNEQIDLAMA---TDCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAH-----PWNTH  103
1fo6a.pdb              58  T-DEAELDSFYETEMP-GPVVRPLFETAAELGIGFNL-GYAELVVE----GGVKRRFNTS  110
                                  D                 E A    I   L G                  NT 

1emsa.pdb             104  LIIDSDGVTRAEYNKLHLFDLEIPG----KVRLMESEFSKAGTEMIPPVDTPIGRLGLSI  159
1fo6a.pdb             111  ILVDKSGKIVGKYRKIHLPG-HKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFI  169
                              D  G     Y K HL                E      G    P  D      G  I

1emsa.pdb             160  CYDVRFPELSLWNRKRGAQLLSFPSAFTL--------N--TGLAHWETLLRARAIENQCY  209
1fo6a.pdb             170  CNDRRWPETWRVMGLKGAEIICGGYNTPTHNPPVPQHDHLT-SFHHLLSMQAGSYQNGAW  228
                           C D R PE        GA                      T   H      A    N   

1emsa.pdb             210  VVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSERV-DMCFAEIDLSYVDTLREMQ---  265
1fo6a.pdb             229  SAAAGKVGMEEGCMLLG-HSCIVAPTGEIVALTTTLEDEVITAALDLDRCRELREHIFNF  287
                             AA   G          HS  V P G  VA           A  DL     LRE     

1emsa.pdb             266  ---PVFSHR------  271
1fo6a.pdb             288  KAHRQPQHYGLIAEF  302
                                  H       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################