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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:15:11 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Cytidylyl_trans.html
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#====================================
# Aligned_structures: 2
#   1: 1ezia.pdb
#   2: 1h7ea.pdb
#
# Length:        265
# Identity:       30/265 ( 11.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     30/265 ( 11.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           74/265 ( 27.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ezia.pdb               1  EKQNIAVILARQNSKGLPLKNLRK-NGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEA   59
1h7ea.pdb               1  -SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAV   59
                                 VI AR  S  LP K L    G     H    A          V TD        

1ezia.pdb              60  KNFGVEVVLRPAA---SSISGVIHALETIGSNSGT-VTLLQPTSPLRTGAHIREAFSLFD  115
1h7ea.pdb              60  QAFGGKAIMTRN-DHESGTDRLVEVMHKVEA-D--IYINLQGDEPMIRPRDVETLLQGMR  115
                             FG            S                      LQ   P               

1ezia.pdb             116  E--KIKGSVVSACPEHHPLKTLL-------QIN-E----YAP-------RHLSDLEQPRQ  154
1h7ea.pdb             116  -DDPALPVATLCHAI-SAAEAA-EPSTVKVVVNTRQDALYFSRSPIPYPRNAE-------  165
                                                           N      Y         R          

1ezia.pdb             155  QLPQAFRPNGAIYINDTASLIANN------------CFFI------APTKLYISHQD---  193
1h7ea.pdb             166  -KARYLKHV-GIYAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEV---AAT  220
                                      IY      L                                        

1ezia.pdb             194  SIDIDTELDLQQAENILN-------  211
1h7ea.pdb             221  GPGVDTPACLEKVRALMAQELAENA  245
                               DT   L               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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