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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Mon Jul 25 15:11:42 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Dehydratase_LU.html
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#====================================
# Aligned_structures: 2
#   1: 1eexa.pdb
#   2: 1iwpa.pdb
#
# Length:        555
# Identity:      391/555 ( 70.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    391/555 ( 70.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            4/555 (  0.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1eexa.pdb               1  -MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSDF   59
1iwpa.pdb               1  MKRSKRFAVLAQRPVNQDGLIGEWPEEGLIAMDSPFDPVSSVKVDNGLIVELDGKRRDQF   60
                             RSKRF  LA RPVNQDG   EW EEG IAM SP DP  S K  NG   ELDGK    F

1eexa.pdb              60  DLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSH  119
1iwpa.pdb              61  DMIDRFIADYAINVERTEQAMRLEAVEIARMLVDIHVSREEIIAITTAITPAKAVEVMAQ  120
                           D ID FIA Y IN  R E  M    V  A ML D  V R EI   TTA TPAK VEV   

1eexa.pdb             120  MNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYA  179
1iwpa.pdb             121  MNVVEMMMALQKMRARRTPSNQCHVTNLKDNPVQIAADAAEAGIRGFSEQETTVGIARYA  180
                           MNVVEMMMA QKMRARRTPS Q HVTN KDNPVQIAADAAE   RGF EQETTV  ARYA

1eexa.pdb             180  PFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTP  239
1iwpa.pdb             181  PFNALALLVGSQCGRPGVLTQCSVEEATELELGMRGLTSYAETVSVYGTEAVFTDGDDTP  240
                           PFNA ALLVGSQ GRPGVLTQCS EEATEL LGM G T YAET SVYGTE VFTDGDDTP

1eexa.pdb             240  WSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGS  299
1iwpa.pdb             241  WSKAFLASAYASRGLKMRYTSGTGSEALMGYSESKSMLYLESRCIFITKGAGVQGLQNGA  300
                           WSK FLAS YASRGLKMR TSG GSE  MGY E KSMLYLE RCI ITK AGVQGLQNG 

1eexa.pdb             300  VSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDF  359
1iwpa.pdb             301  VSCIGMTGAVPSGIRAVLAENLIASMLDLEVASANDQTFSHSDIRRTARTLMQMLPGTDF  360
                           VSCIG   AVPSGIRAVLAENLI S LDLE AS NDQTF HSD RRTAR LMQ LPGTDF

1eexa.pdb             360  ISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARAL  419
1iwpa.pdb             361  IFSGYSAVPNYDNMFAGSNFDAEDFDDYNILQRDLMVDGGLRPVTEAETIAIRQKAARAI  420
                           I SGYSAVPNYDNMFAGSN DAEDFDDYN  QRDL VDGGLRPV E   IAIR KAARA 

1eexa.pdb             420  QAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQ  479
1iwpa.pdb             421  QAVFRELGLPPIADEEVEAATYAHGSNEMPPRNVVEDLSAVEEMMKRNITGLDIVGALSR  480
                           QAVF   GLPPI DEEVEAATYAHGS  MP RN VED     E    N  GL  V AL  

1eexa.pdb             480  GGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWE  539
1iwpa.pdb             481  SGFEDIASNILNMLRQRVTGDYLQTSAILDRQFEVVSAVNDINDYQGPGTGYRISAERWA  540
                            GF D A   LN      TGDYL TSAI      V SAVND NDY GP TGYR   ERW 

1eexa.pdb             540  EIKNIPGALDPN---  551
1iwpa.pdb             541  EIKNIPGVVQPDTIE  555
                           EIKNIPG   P    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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