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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:39:38 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/E1_dehydrog.html
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#====================================
# Aligned_structures: 2
#   1: 1dtwa.pdb
#   2: 1qs0a.pdb
#
# Length:        438
# Identity:      129/438 ( 29.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    129/438 ( 29.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           99/438 ( 22.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1dtwa.pdb               1  PQFPGASAEFIDKLEFIQPNV-ISG----------------------------------I   25
1qs0a.pdb               1  -----NEY---APLRLHVPEPTGR-PGCQTDFSYLRLNDAGQARKPPVDVDAADTADLSY   51
                                        L    P                                         

1dtwa.pdb              26  PIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYM--TN   83
1qs0a.pdb              52  SLVRVLDEQGDAQG-PWAEDIDPQILRQG-RA-LKTRIFDSR-VVAQRQKKS----FYQS  103
                              RV D QG                             D      QRQ           

1dtwa.pdb              84  YGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVH  143
1qs0a.pdb             104  LGEEAIGSGQALALNRTD-CFPTYRQQSIL-ARDVSLVE-ICQLLSNERDPLKGRQLPI-  159
                            GEE    G A AL  TD  F  YR    L  RD  L     Q   N  D  KGRQ P  

1dtwa.pdb             144  YGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAA  203
1qs0a.pdb             160  YSVREAGFFTISGNLATQFVQAVGWA-ASAIKGDTKIASAWIGDGATAESDFHTALTFAH  218
                           Y   E  F TIS  LATQ  QAVG A A              G GA  E D H    FA 

1dtwa.pdb             204  TLECPIIFFCRNNGYAISTPTSEQYRG--DGIAARGPGYGIMSIRVDGNDVFAVYNATKE  261
1qs0a.pdb             219  VYRAPVILNVVNNQWAISTFQAIAGG-ESTTFAGRGVGCGIASLRVDGNDFVAVYAASRW  277
                               P I    NN  AIST             A RG G GI S RVDGND  AVY A   

1dtwa.pdb             262  ARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYR-----------HPISRLRHYLLSQGW  310
1qs0a.pdb             278  AAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGH  337
                           A  RA     P LIE  TYR G HSTSDD S YR            PI RL   L   G 

1dtwa.pdb             311  WDEEQEKAWRKQSRRKVMEAFEQAERKP------KPNPNLLFSDVYQEMPAQLRKQQESL  364
1qs0a.pdb             338  WSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAA-SFEDVYKE-PDHLRRQRQEL  395
                           W EE   A        V  A   AE          P     F DVY E P  LR Q   L

1dtwa.pdb             365  ARHLQTYGEHYPLDHFDK  382
1qs0a.pdb                  ------------------     
                                             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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