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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:01:58 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/EFTU_C.html
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#====================================
# Aligned_structures: 3
#   1: 1d2ea.pdb
#   2: 1efca.pdb
#   3: 1eft.pdb
#
# Length:        107
# Identity:       35/107 ( 32.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     80/107 ( 74.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/107 ( 13.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1d2ea.pdb               1  ----HQKVEAQVYILTKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPGKELAMPGEDL   56
1efca.pdb               1  TIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNI   60
1eft.pdb                1  ----HTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNV   56
                               HtKfEa VYiL KeEGGRHtpFfsgyrPqfyfrTtDvtg i LP GvEmvMPGdn 

1d2ea.pdb              57  KLTLILRQPMILEKGQRFTLRDGNRTIGTGLVTDTPAMTEEDKNIKW  103
1efca.pdb              61  KMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS----------   97
1eft.pdb               57  TFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE----------   93
                           k tv Li P ale GlRFaiReGgRTvGaGvVtk l           


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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