################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:01:20 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/EF_TS.html
################################################################################################
#====================================
# Aligned_structures: 3
#   1: 1efud1.pdb
#   2: 1efud2.pdb
#   3: 1tfe.pdb
#
# Length:        219
# Identity:        5/219 (  2.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     44/219 ( 20.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          138/219 ( 63.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1efud1.pdb              1  -AEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAA-D   58
1efud2.pdb              1  ---------------------------------------------------------D-V    2
1tfe.pdb                1  A--------------------------------------------------------REG    4
                                                                                       

1efud1.pdb             59  GVIKTKID-GNYGIILE----------------------------VNCQT-DFVA-KDAG   87
1efud2.pdb              3  LGSYQHG--ARIGVLVAAKG----------ADEELVKHIAMHVAASKPEFIKPEDVSAEV   50
1tfe.pdb                5  IIGHYIHHNQRVGVLVELNCETDFVARNEL-FQNLAKDLAMHIAMMNPRYVSAEEIPAEE   63
                                     r Gvlve                             np     e   ae 

1efud1.pdb             88  FQAFADKVLDAAVAGKIT--------DVEVLKAQFEE-----------------ERVALV  122
1efud2.pdb             51  VEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSK----TVGQLL  106
1tfe.pdb               64  LEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAI  123
                            eke q  ldaA   gkp        egr kK   Ev                    ql 

1efud1.pdb            123  AKIGENINI-RRVAALEG---------------------  139
1efud2.pdb            107  KEHNAEVT--GFIRFEVGEGIEKVETDFAAEVAAMSKQS  143
1tfe.pdb              124  AKIGENIVVRRFCRFELGA--------------------  142
                           akigeni   rf rfe G                     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################