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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:48:33 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/FAA_hydrolase.html
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#====================================
# Aligned_structures: 2
#   1: 1gtta.pdb
#   2: 1hyoa.pdb
#
# Length:        308
# Identity:       34/308 ( 11.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     34/308 ( 11.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          116/308 ( 37.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1gtta.pdb               1  HPHGTLFALGLNYAD------------------H-PEEPLVFLKAPNTLTGDNQTSVRP-   40
1hyoa.pdb               1  ATIGDYTDFYS-SRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPM   59
                              G                                  P                  RP 

1gtta.pdb              41  --------------NNIEYMHYEAELVVVIGKQA---RNVSEADAMDYVAGYTVCNDYAI   83
1hyoa.pdb              60  GQMRPDNSKPPVYGA-CRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSA  118
                                                 E E     G             A     G    ND   

1gtta.pdb              84  RDYLE---NYYRPNLRVKSRDGLTPMLSTIVPKEAIPDP---------------------  119
1hyoa.pdb             119  RDIQQWEYVPLG-PFLGKSF--GTTISPWVVPMDALM--PFVVPNPKQDPKPLPYLCHSQ  173
                           RD               KS    T      VP  A                         

1gtta.pdb             120  ---HNLTLRTFVN------GELRQQGTTADLIFSVPFLIAYLSEF-MTLNPGDMIATGTP  169
1hyoa.pdb             174  PYTFDINLSVSLKGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTI  233
                                  L                                  S     L PGD  A GT 

1gtta.pdb             170  -K-GL-------------------------SDVVPGDEVVVEVE--------GVGRLVNR  194
1hyoa.pdb             234  SGSDPESFGSMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGK  293
                                                              GDEV             G G     

1gtta.pdb             195  IVSEETAK  202
1hyoa.pdb             294  VLPAL---  298
                                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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