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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:00:46 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/G6PD.html
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#====================================
# Aligned_structures: 2
#   1: 1dpga.pdb
#   2: 1qkia.pdb
#
# Length:        208
# Identity:       55/208 ( 26.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     55/208 ( 26.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           31/208 ( 14.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1dpga.pdb               1  V---SEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQL   57
1qkia.pdb               1  -VCHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTV--ADIR   57
                                         G  GDLAK K YP    L   G L     IVG AR  L        

1dpga.pdb              58  VRDCIKDFTD------DQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDI---  108
1qkia.pdb              58  KQSEPF----FKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALH-----LGS  108
                                                E F    SY A    DAASY  L                

1dpga.pdb             109  DGNRIFYMSVAPRFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAF  168
1qkia.pdb             109  QANRLFYLALPPTVYEAVTKNIHE-SCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLF  167
                             NR FY    P       K           G NR   EKPFG        L N     F

1dpga.pdb             169  DDNQLFRIDHYLGEPYERMIHDTMNGD-  195
1qkia.pdb             168  REDQIYRI-----DAYERLILDVFCGSQ  190
                              Q  RI       YER I D   G  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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