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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:30:11 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/GTP_cyclohydroI.html
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#====================================
# Aligned_structures: 2
#   1: 1fb1a.pdb
#   2: 1fbxa.pdb
#
# Length:        225
# Identity:       68/225 ( 30.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     68/225 ( 30.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           33/225 ( 14.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fb1a.pdb               1  -----------------GERPRSEE------DNELNLPNLAAAYSSILSSLGENPQRQGL   37
1fbxa.pdb               1  PSLSKEAALVHEALVARGLETPLR-PPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSL   59
                                            G             DNE      A     I   L        L

1fb1a.pdb              38  LKTPWRAASAMQ-FFTKGYQE--TISDVL-NDAIFDEDHDEMVIVKDIDMFSMCEHHLVP   93
1fbxa.pdb              60  METPHRIAKMYVDEIFSGLDYANFPK---ITLIENKMKVDEMVTVRDITLTSTCEHHFVT  116
                             TP R A         G                     DEMV V DI   S CEHH V 

1fb1a.pdb              94  FVGKVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALRPAGVGVVVE  153
1fbxa.pdb             117  IDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSID  176
                             GK    Y P   V GLSK  RIV     R QVQERLT QI  A    L    V V   

1fb1a.pdb             154  ATHMCMVMRGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIRS--  196
1fbxa.pdb             177  AVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN  221
                           A H C   RG     S T T    G F     TR EFL   R   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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