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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:20:17 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Glyco_hydro_2_N.html
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#====================================
# Aligned_structures: 2
#   1: 1bhga.pdb
#   2: 1dp0a.pdb
#
# Length:        251
# Identity:       29/251 ( 11.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     29/251 ( 11.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           91/251 ( 36.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bhga.pdb               1  G--------------LQGGMLYPQESP------------SRECKELDGLWSFRADFSDNR   34
1dp0a.pdb               1  -RRDWENPGVTQLNRL-AAHPPFASWRNSEEARTDRPSQQ-LRS-LNGEWRFAWFP----   52
                                          L                             L G W F        

1bhga.pdb              35  R-RGFEE-QWYRRPLWESGPTVDMPVPSSFNDISQD------WRLR-H--------FV-G   76
1dp0a.pdb              53  -APEAVPESWLECDLP---EADTVVVPSNWQMHG-YDAPIYTNVTYPITVNPPFVPTENP  107
                                    W    L          VPS                                

1bhga.pdb              77  WVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLV  136
1dp0a.pdb             108  TGCYSLTFNVDESWL-Q-EGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFD----L  161
                              Y       E W                S    W NG          LP E D     

1bhga.pdb             137  QVGPLP-SRLRITIAINNTLTPTTLPPGTIQYLTDTSKY--PKGYFVQNTYFDFFNYAGL  193
1dp0a.pdb             162  SAFLR-AGENRLAVMVLR-WSD-----------------GSYLE------DQDMWRMSGI  196
                                     R                                         D     G 

1bhga.pdb             194  QRSVLLYTTPT  204
1dp0a.pdb             197  FRDVSLLHKPT  207
                            R V L   PT


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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