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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 14:35:14 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/HATPase_c.html
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#====================================
# Aligned_structures: 6
#   1: 1ah6.pdb
#   2: 1b63a.pdb
#   3: 1byq.pdb
#   4: 1ei1a.pdb
#   5: 1h7sa.pdb
#   6: 1kija.pdb
#
# Length:        296
# Identity:       10/296 (  3.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     11/296 (  3.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          165/296 ( 55.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ah6.pdb                1  ---A-S--E-------TFEFQAEITQLMSL---IINTV--YS------NKEIFLRELISN   36
1b63a.pdb               1  --SHM-----------PIQVLPPQLANQIAAGEVVE------------RPASVVKELVEN   35
1byq.pdb                1  PM-EEEEVE-------TFAFQAEIAQLMSL---IINTF--YS------NKEIFLRELISN   41
1ei1a.pdb               1  ---------SNSSDSSSIKVLKGLDAVRKRPGMYIG------DTDDGTGLHHMVFEVVDN   45
1h7sa.pdb               1  -----------------------------------G--QVVL------SLSTAVKELVEN   17
1kija.pdb               1  ----------------AIRVLKGLEGVRHRPAMYIG------GT-GVEGYHHLFKEILDN   37
                                                                                  E   N

1ah6.pdb               37  ASDALDKIRYKSLSDPKQLETEP-DLFIRITPKPEQ---KVLEIRDSGIGMTK-------   85
1b63a.pdb              36  SLDAG-------------------ATRIDIDIE-R-GGAKLIRIRDNGCGIKK-------   67
1byq.pdb               42  SSDALDKIRYETLTDPSKLDSGK-ELHINLIPNKQD---RTLTIVDTGIGMTK-------   90
1ei1a.pdb              46  AIDEALAG---------------HCKEIIVTIH-AD---NSVSVQDDGRGIPTGIHPEEG   86
1h7sa.pdb              18  SLDAG-------------------ATNIDLKLK-D-YGVDLIEVSDNGCGVEE-------   49
1kija.pdb              38  AVDEALAG---------------YATEILVRLN-ED---GSLTVEDNGRGIPVDLMPEEG   78
                             D                        I                 D G G          

1ah6.pdb               86  -AELINNLGTIAK--SGT--KAF--MEALSAGADVSMIGQ----F-GVGFYSLFLVADRV  133
1b63a.pdb              68  -DELALALAR-HATS-KIASLDDLEAI-----I-------SLGFR-GEALASISS-VSRL  110
1byq.pdb               91  -ADLINNLGTIAK--SGT--KAF--MEALQAGADISMIGQ----F-GVGFYSAYLVAEKV  138
1ei1a.pdb              87  VSAAEVIMTV-LHAGGKF-DDNSYK-------V-------SGGLH-GVGVSVVNALSQKL  129
1h7sa.pdb              50  -ENFEGLTL---------A-DLTQVET-----F-------G--FR-GEALSSLCA-LSDV   82
1kija.pdb              79  KPAVEVIYNT-LHSGGKF----EQGAY-----K-------VSGGLHGVGASVVNALSEWT  121
                                                                         G             

1ah6.pdb              134  QVISKSN-DDEQYIWESN-AGGS--FTVTLDEVNE---RIGRGTILRLFLKD-DQL----  181
1b63a.pdb             111  TLTSRTAEQQEAWQAYAEGRDMN--V--TVKP--A---AHPVGTTLEVLDLFYNTP-ARR  160
1byq.pdb              139  TVITKHN-DDEQYAWESS-AGGS--FTVRTDTG-E---PMGRGTKVILHLKE-DQT----  185
1ei1a.pdb             130  ELVIQR--EGKIHRQIYE-HG-VPQAPLAVTG--ET--E-KTGTMVRFWPSL-ETFTN--  177
1h7sa.pdb              83  TISTCHASAKVGTRLFD--HNGKI-I--QKTP--Y---PRPRGTTVSVQQLFSTLP-VRH  131
1kija.pdb             122  VVEVFR--EGKHHRIAFS-RG-EVTEPLRVVG--EAPRG-KTGTRVTFKPDP-EIFGN--  171
                                                                     GT                

1ah6.pdb              182  -EY--L-----EEKRIKEVIKRHSEF--VAYPIQLVVTK-EVE-------------  213
1b63a.pdb             161  KFL--R-TEKTEFNHIDEIIRRIAL-ARFDVTINLSHN--G---K--IVRQYRAV-  204
1byq.pdb              186  -EY--L-----EERRIKEIVKKHSQF--IGYPITLFVE------------------  213
1ei1a.pdb             178  VT-E-F-----EYEILAKRLRELSF-LDSGVSIRLRDKR-D--GK--E-DHFHYEG  219
1h7sa.pdb             132  KEF-QRNI-KKEYAK-VQVLHAYCI-ISAGIRVSCTNQLGQ--GKRQPVVCT----  177
1kija.pdb             172  -L-R-F-----DPSKIRARLREVAY-LVAGLKLVFQDRQ-H--GK--E-EVFLDKG  212
                                      e                                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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