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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 07:46:47 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/MM_CoA_mutase.html
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#====================================
# Aligned_structures: 4
#   1: 1b1a.pdb
#   2: 1be1.pdb
#   3: 1bmta.pdb
#   4: 7reqa.pdb
#
# Length:        213
# Identity:        9/213 (  4.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     34/213 ( 16.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           97/213 ( 45.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1b1a.pdb                1  -------------------------------------MEKKTIVLGV--IGSDCHAVG--   19
1be1.pdb                1  -------------------------------------MEKKTIVLGV--IGSDCHAVG--   19
1bmta.pdb               1  EQG----------------------------------KTNGKMVIATVKGDVHD----IG   22
7reqa.pdb               1  ---AQIRTISGVYSKEVKNTPEVEEARELVEEFEQAEGRRPRILLAKMGQDGHD----RG   53
                                                                     ivl               

1b1a.pdb               20  -NKILDHAF-TNAGFNVVNIGVLSPQEVFIKAAIETKADAILLSSLYGQGE-IDCKGLRQ   76
1be1.pdb               20  -NKIL-DHSFTNAGFNVVNIGVLSSQEDFINAAIETKADLICVSSLYGQG-EIDCKGLRE   76
1bmta.pdb              23  KNIVG-VVL-QCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPS-LDEMVNVAK   79
7reqa.pdb              54  QKVIA-TAY-ADLGFDVDVGPLFQTPEETARQAVEADVHVVGVSSLAGGH-LTLVPALRK  110
                            n i         gf vv  gv    E     A E  ad i  SsL g         lr 

1b1a.pdb               77  KCDEAGLEG----ILLYVGGNIVVGKQHWP-DV-EKRFKDM--G-YDRVYAPGTPPEVGI  127
1be1.pdb               77  KCDEA----GLKGIKLFVGGNIVVGKQNWP-DV-EQRFKAMG-F-DR-VYPPGTS-PETT  126
1bmta.pdb              80  EMERQGFT-----IPLLIGGA-TT-----SKAHTAVKIEQNYSG-PT-VYV--QNASRTV  124
7reqa.pdb             111  ELDKLGRPD----ILITVGGV-IP-----E-QD-FDELRKDG--AVE-IYTPGTVIPESA  155
                             d          I l vGG                            vY   t      

1b1a.pdb              128  ADLKKDLN-IE----------------------  137
1be1.pdb              127  IADMKEVL-GVE---------------------  137
1bmta.pdb             125  GVVAALLSDTQ-RDDFVARTRKEYETVRIQHGR  156
7reqa.pdb             156  ISLVKKLR-AS-LDA------------------  168
                               k l                          


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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