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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 21:15:24 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Me-amine-deh_L.html
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#====================================
# Aligned_structures: 2
#   1: 1mdal.pdb
#   2: 2bbkl.pdb
#
# Length:        125
# Identity:       93/125 ( 74.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     93/125 ( 74.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            4/125 (  3.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1mdal.pdb               1  VDPRAKWQPQDNDIQACDYWRHCSIAGNICDCSAGSLTSCPPGTLVASGSWVGSCYNPPD   60
2bbkl.pdb               1  TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASWVASCYNPTD   60
                            DPRAKW PQDNDIQACDYWRHCSI GNICDCS GSLT CPPGT  A  SWV SCYNP D

1mdal.pdb              61  PNKYITAYRDCCGYNVSGRCACLNTEGELPVY-NKDANDIIWCF-GGEDGMTYHCSISPV  118
2bbkl.pdb              61  GQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPI  120
                              Y  AYRDCCGYNVSGRC CLNTEGELPVY    ANDIIWCF    D MTYHC ISP 

1mdal.pdb             119  SGA--  121
2bbkl.pdb             121  VGKAS  125
                            G   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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