################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 04:07:28 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/PSI_PsaE.html
################################################################################################
#====================================
# Aligned_structures: 3
#   1: 1jb0e.pdb
#   2: 1psf.pdb
#   3: 1qp3a.pdb
#
# Length:         79
# Identity:       40/ 79 ( 50.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     55/ 79 ( 69.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           18/ 79 ( 22.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1jb0e.pdb               1  -VQRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYS-GSASGVNTN   58
1psf.pdb                1  AIERGSKVKILRKESYWYGDVGTVASIDKS-GIIYPVIVRFNKVNYNGFSGSAG-GLNTN   58
1qp3a.pdb               1  MVQRGSKVRILRPESYWFQDVGTVASVDQS-GIKYPVIVRFEKVNYS--------GINTN   51
                            vqRGSKVkILRpESYWy dVGTVASvDqs GikYPVIVRF KVNY         G NTN

1jb0e.pdb              59  NFALHEVQEVA--------   69
1psf.pdb               59  NFAEHELEVVG--------   69
1qp3a.pdb              52  NFAEDELVEVEAPKAKPKK   70
                           NFAehEl eV         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################