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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 23:09:41 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/S-AdoMet_syntD2.html
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#====================================
# Aligned_structures: 2
#   1: 1mxb.pdb
#   2: 1qm4a.pdb
#
# Length:        128
# Identity:       58/128 ( 45.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     58/128 ( 45.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            9/128 (  7.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1mxb.pdb                1  RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQ   60
1qm4a.pdb               1  ----EDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQ   56
                                  GAGDQGLMFGYAT ET   MP  I  AH L  R A  R  G LPWLRPD K Q

1mxb.pdb               61  VTFQYDD----GKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFF  116
1qm4a.pdb              57  VTVQYVQDNGAVIPVRVHTIVISVQHNEDITLEAMREALKEQVIKAVVPAKYLDEDTIYH  116
                           VT QY         V     V S QH E I      EA  E  IK   PA  L   T   

1mxb.pdb              117  INPTGRFV  124
1qm4a.pdb             117  LQPSGRF-  123
                             P GRF 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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