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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 23:20:00 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/STAS.html
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#====================================
# Aligned_structures: 2
#   1: 1buz.pdb
#   2: 1h4xa.pdb
#
# Length:        124
# Identity:       34/124 ( 27.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     34/124 ( 27.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           22/124 ( 17.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1buz.pdb                1  SLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDI---RHIVLNLEDLSFMDS   57
1h4xa.pdb               1  AFQLEM-VTRETVVIRLFGELDHHAVEQIRAKISTAIFQ---GAVTTIIWNFERLSFMD-   55
                                M V      IRL GELDHH  E    K               I  N E LSFMD 

1buz.pdb               58  SGLGVILGRYKQIKQIGGEMVVCAISPAVKRLFDMSGLFKIIRFE----QSEQQALLTLG  113
1h4xa.pdb              56  SGVGLVLGRMRELEAVAGRTILLNPSPTMRKVFQFSG-LGPWM--MDATEEEAIDRV---  109
                           SG G  LGR        G       SP     F  SG              E        

1buz.pdb              114  VAS-  116
1h4xa.pdb             110  ---R  110
                               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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