################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 23:27:11 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Thioesterase.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1jmkc.pdb
#   2: 1keza.pdb
#
# Length:        287
# Identity:       34/287 ( 11.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     34/287 ( 11.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           85/287 ( 29.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1jmkc.pdb               1  GG------------SDGL------------------------Q-DVTIMNQ-DQEQIIFA   22
1keza.pdb               1  --SSALRDGYRQAGVSGRVRSYLDLLAGLSDFREHFDGSDGFSLDLVDMADGPGEVTVIC   58
                                           G                           D   M     E     

1jmkc.pdb              23  FPPV---LGYGLMYQNLSSRLPS-YKLCAFDFIE-EE----------DRLDRYADLIQKL   67
1keza.pdb              59  CAGTAAIS-GPHEFTRLAGALRGIAPVRAVPQPGYE-EGEPLPSSMAAVAAVQADAVIRT  116
                                           L   L       A      E                 AD     

1jmkc.pdb              68  QPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS------SDVEALM  121
1keza.pdb             117  QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPG-H-QDAMNAWLEELTA  174
                           Q   P    G SAG   A   A  L   G         D Y               E   

1jmkc.pdb             122  NVNRDNEALNSEAV-KHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADF--DIPEWL  178
1keza.pdb             175  TLFDRETV-R----MDDTRLTALGAYDRLTGQWRP-RETGLPTLLVSAGEP-MGPWPDDS  227
                                                   A                   L   G       P   

1jmkc.pdb             179  ---ASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNTQT  222
1keza.pdb             228  WKPTWPF-----EHDTVAVPGDHFTMVQE-HADAIARHIDAWLGGG-  267
                                               G H  M Q    D  A      L    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################