################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sun Jul 24 06:18:08 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/az.html
################################################################################################
#====================================
# Aligned_structures: 22
#   1: 1adwa.pdb
#   2: 1arn.pdb
#   3: 1azu.pdb
#   4: 1bawa.pdb
#   5: 1iuz.pdb
#   6: 1joi.pdb
#   7: 1kdj.pdb
#   8: 1mdae.pdb
#   9: 1nin.pdb
#  10: 1nwpa.pdb
#  11: 1paz.pdb
#  12: 1pcs.pdb
#  13: 1pla.pdb
#  14: 1plc.pdb
#  15: 1pmy.pdb
#  16: 1rkra.pdb
#  17: 1zia.pdb
#  18: 2azaa.pdb
#  19: 2pcfa.pdb
#  20: 2plt.pdb
#  21: 7pcy.pdb
#  22: 9pcy.pdb
#
# Length:        201
# Identity:        5/201 (  2.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      5/201 (  2.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          132/201 ( 65.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1adwa.pdb               1  ------------------ATHEVHMLNKGESGAMVFEPAFVRAEP---GDVINFVPTD--   37
1arn.pdb                1  AQ----------------CEATVESN-----DAMQYNVKEIVVDKSCKQFTMHLKHVG-K   38
1azu.pdb                1  ------------------CSVDIQGN-----DQMQFNTNAITVDKSCKQFTVNLSHPG-N   36
1bawa.pdb               1  ------------------ETFTVKMG-A-DSGLLQFEPANVTVHP---GDTVKWVNNKL-   36
1iuz.pdb                1  -------------------AQIVKLG-G-DDGSLAFVPSKISVAA---GEAIEFVNNAG-   35
1joi.pdb                1  AE----------------CKVTVDST-----DQMSFNTKAIEIDKSCKTFTVELTHSG-S   38
1kdj.pdb                1  --------------------AKVEVG-D-EVGNFKFYPDSITVSA---GEAVEFTLVGE-   34
1mdae.pdb               1  --ATIPSESPFAAAEVADGAIVVDIA-K-----MKYETPELHVKV---GDTVTWINREA-   48
1nin.pdb                1  ------------------ETYTVKLG-S-DKGLLVFEPAKLTIKP---GDTVEFLNNKV-   36
1nwpa.pdb               1  AE----------------CKVTVDST-----DQMSFNTKDIAIDKSCKTFTVELTHSG-S   38
1paz.pdb                1  ------------------ENIEVHMLNKGAEGAMVFEPAYIKANP---GDTVTFIPVD--   37
1pcs.pdb                1  ------------------ANATVKMG-S-DSGALVFEPSTVTIKA---GEEVKWVNNKL-   36
1pla.pdb                1  --------------------AEVKLG-S-DDGGLVFSPSSFTVAA---GEKITFKNNAG-   34
1plc.pdb                1  --------------------IDVLLG-A-DDGSLAFVPSEFSISP---GEKIVFKNNAG-   34
1pmy.pdb                1  ------------------DEVAVKMLNSGPGGMMVFDPALVRLKP---GDSIKFLPTD--   37
1rkra.pdb               1  AE----------------CSVDIAGN-----DGMQFDKKEITVSKSCKQFTVNLKHPG-K   38
1zia.pdb                1  ------------------ADFEVHMLNKGKDGAMVFEPASLKVAP---GDTVTFIPTD--   37
2azaa.pdb               1  AQ----------------CEATIESN-----DAMQYDLKEMVVDKSCKQFTVHLKHVG-K   38
2pcfa.pdb               1  --------------------VEVLLG-G-GDGSLAFLPGDFSVAS---GEEIVFKNNAG-   34
2plt.pdb                1  -------------------DATVKLG-A-DSGALEFVPKTLTIKS---GETVNFVNNAG-   35
7pcy.pdb                1  -------------------AAIVKLG-G-DDGSLAFVPNNITVGA---GESIEFINNAG-   35
9pcy.pdb                1  --------------------LEVLLG-S-GDGSLVFVPSEFSVPS---GEKIVFKNNAG-   34
                                                                                       

1adwa.pdb              38  -----KSHNVEAIKE------------------------ILPEGVES------------F   56
1arn.pdb               39  MAKVAMGHNLVLTKD-ADKQAVATDGMGAGLAQDYVKAG---------DTR---VIAHT-   84
1azu.pdb               37  LPKNVMGHNWVLSTA-ADMQGVVTDGMASGLDKDYLKPD---------DSR---VIAHT-   82
1bawa.pdb              37  -----PPHNILFDDK------------------------QVPG----ASKELADK----L   59
1iuz.pdb               36  -----FPHNIVFDED------------------------AVPAGVDA------DA----I   56
1joi.pdb               39  LPKNVMGHNWVLSSA-ADMPGIASDGMAAGIDKNYLKEG---------DTR---VIAHT-   84
1kdj.pdb               35  -----TGHNIVFDIPAGAPGTVASELKAA-----SMDEN---------------------   63
1mdae.pdb              49  -----MPHNVHFVAG------------------------VLGEAALK------------G   67
1nin.pdb               37  -----PPHNVVFDAA------------------------LNPA----KSADLAKS----L   59
1nwpa.pdb              39  LPKNVMGHNLVISKE-ADMQPIATDGLSAGIDKQYLKDG---------DAR---VIAHT-   84
1paz.pdb               38  -----KGHNVESIKD------------------------MIPEGAEK------------F   56
1pcs.pdb               37  -----SPHNIVFDAD-------------------------G------VPADTAAK----L   56
1pla.pdb               35  -----FPHNIVFDED------------------------EVPAGVNA------EK----I   55
1plc.pdb               35  -----FPHNIVFDED------------------------SIPSGVDA------SK----I   55
1pmy.pdb               38  -----KGHNVETIKG------------------------MAPDGADY------------V   56
1rkra.pdb              39  LAKNVMGHNWVLTKQ-ADMQGAVNDGMAAGLDNNYVKKD---------DAR---VIAHT-   84
1zia.pdb               38  -----KGHNVETIKG------------------------MIPDGAEA------------F   56
2azaa.pdb              39  MAKSAMGHNWVLTKE-ADKEGVATDGMNAGLAQDYVKAG---------DTR---VIAHT-   84
2pcfa.pdb              35  -----FPHNVVFDED------------------------EIPSGVDA------AK----I   55
2plt.pdb               36  -----FPHNIVFDED------------------------AIPSGVNA------DA----I   56
7pcy.pdb               36  -----FPHNIVFDED------------------------AVPAGVDA------DA----I   56
9pcy.pdb               35  -----FPHNVVFDED------------------------EIPAGVDA------VK----I   55
                                  HN                                                   

1adwa.pdb              57  KSK--I------NESYTLTVT---EP-GLYGVKCTP-HFGMGMVGLVQVGDAPENLDAAK  103
1arn.pdb               85  -----KVIGGGESDSVTFDVS-KIAAGENYAYFCSFPGHWAMMKGTLKLGS---------  129
1azu.pdb               83  -----KLIGSGEKDSVTFDVS-KLKEGEQYMFFCTFPGHSALMKGTLTLK----------  126
1bawa.pdb              60  SHS--QLMFS-PGESYEITFSSDFPA-GTYTYYCAP-HRGAGMVGKITVEG---------  105
1iuz.pdb               57  SYD--DYLNS-KGETVVRKLS---TP-GVYGVYCEP-HAGAGMKMTITVQ----------   98
1joi.pdb               85  -----KIIGAGEKDSVTFDVS-KLAAGTDYAFFCSFPGHISMMKGTVTVK----------  128
1kdj.pdb               64  -----DLLSEDE-PSFKAKVS---TP-GTYTFYCTP-HKSANMKGTLTVK----------  102
1mdae.pdb              68  PMM--K-----KEQAYSLTFT---EA-GTYDYHCTP-HP--FMRGKVVVE----------  103
1nin.pdb               60  SHK--QLLMS-PGQSTSTTFPADAPA-GEYTFYCEP-HRGAGMVGKITVAG---------  105
1nwpa.pdb              85  -----KVIGAGEKDSVTFDVS-KLAAGEKYGFFCSFPGHISMMKGTVTLK----------  128
1paz.pdb               57  KSK--I------NENYVLTVT---QP-GAYLVKCTP-HYAMGMIALIAVGDSPANLDQIV  103
1pcs.pdb               57  SHK--GLLFA-AGESFTSTFT---EP-GTYTYYCEP-HRGAGMVGKVVVE----------   98
1pla.pdb               56  SQP--EYLNG-AGETYEVTLT---EK-GTYKFYCEP-HAGAGMKGEVTVN----------   97
1plc.pdb               56  SMSEEDLLNA-KGETFEVALS---NK-GEYSFYCSP-HQGAGMVGKVTVN----------   99
1pmy.pdb               57  KTT--V------GQEAVVKFD---KE-GVYGFKCAP-HYMMGMVALVVVGDKRDNLEAAK  103
1rkra.pdb              85  -----KVIGGGETDSVTFDVS-KLAAGEDYAYFCSFPGHFALMKGVLKLVD---------  129
1zia.pdb               57  KSK--I------NENYKVTFT---AP-GVYGVKCTP-HYGMGMVGVVQVGDAPANLEAVK  103
2azaa.pdb              85  -----KVIGGGESDSVTFDVS-KLTPGEAYAYFCSFPGHWAMMKGTLKLSN---------  129
2pcfa.pdb              56  SMSEEDLLNA-PGETYKVTLT---EK-GTYKFYCSP-HQGAGMVGKVTVN----------   99
2plt.pdb               57  SRD--DYLNA-PGETYSVKLT---AA-GEYGYYCEP-HQGAGMVGKIIVQ----------   98
7pcy.pdb               57  SAE--DYLNS-KGQTVVRKLT---TP-GTYGVYCDP-HSGAGMKMTITVQ----------   98
9pcy.pdb               56  SMPEEELLNA-PGETYVVTLD---TK-GTYSFYCSP-HQGAGMVGKVTVN----------   99
                                                        Y   C        M                 

1adwa.pdb             104  TAKMPKKARERMDAELAQVN-  123
1arn.pdb                   ---------------------     
1azu.pdb                   ---------------------     
1bawa.pdb                  ---------------------     
1iuz.pdb                   ---------------------     
1joi.pdb                   ---------------------     
1kdj.pdb                   ---------------------     
1mdae.pdb                  ---------------------     
1nin.pdb                   ---------------------     
1nwpa.pdb                  ---------------------     
1paz.pdb              104  SAKKPKIVQERLEKVIA----  120
1pcs.pdb                   ---------------------     
1pla.pdb                   ---------------------     
1plc.pdb                   ---------------------     
1pmy.pdb              104  SVQHNKLTQKRLDPLFAQIQ-  123
1rkra.pdb                  ---------------------     
1zia.pdb              104  GAKNPKKAQERLDAALAALGN  124
2azaa.pdb                  ---------------------     
2pcfa.pdb                  ---------------------     
2plt.pdb                   ---------------------     
7pcy.pdb                   ---------------------     
9pcy.pdb                   ---------------------     
                                                


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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