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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:38:41 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/dTDP_sugar_isom.html
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#====================================
# Aligned_structures: 2
#   1: 1dzra.pdb
#   2: 1ep0a.pdb
#
# Length:        190
# Identity:       87/190 ( 45.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     87/190 ( 45.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/190 (  7.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1dzra.pdb               1  MMIVIKTAIPDVLILEPKVFGDER-GFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVL   59
1ep0a.pdb               1  EFRFIKTSLDGAIIIEPEVYTD-ERGYFMETFNEAIFQENG-LEVRFVQDNESMSVRGVL   58
                               IKT      I EP V  D   G F E  N   F E     V FVQDN S S   VL

1dzra.pdb              60  RGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFA  119
1ep0a.pdb              59  RGLHFQR-EKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFA  117
                           RGLHFQR E  QGKLVR   GE FDVAVD RK S T G W GV LS EN R   IPEGFA

1dzra.pdb             120  HGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFS--QLPELSAKDAAAPLLD  177
1ep0a.pdb             118  HGFLALSDECIVNYKCTELYHPEYDSGIPWDDPDIGIDWPLEMVDDLIISEKDRNWKPLR  177
                           HGF  LS      YK T  Y P     I W D  IGI WP         S KD     L 

1dzra.pdb             178  QALLTE----  183
1ep0a.pdb             178  EN----PVYL  183
                                     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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