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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Aug 12 22:25:20 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/MUSTANG_HOMSTRAD/results/egf.html
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#====================================
# Aligned_structures: 12
#   1: 1apo.pdb
#   2: 1dan1.pdb
#   3: 1dan2.pdb
#   4: 1epi.pdb
#   5: 1esl.pdb
#   6: 1fsb.pdb
#   7: 1hcgb.pdb
#   8: 1hre.pdb
#   9: 1ixa.pdb
#  10: 1rfnb.pdb
#  11: 1urk.pdb
#  12: 4tgf.pdb
#
# Length:        137
# Identity:        1/137 (  0.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      1/137 (  0.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          130/137 ( 94.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1apo.pdb                1  --------------------------------------KD-GDQCEGHPCLNQGHCKDGI   21
1dan1.pdb               1  -----------------------------------------GDQCASSPCQNGGSCKDQL   19
1dan2.pdb               1  ---D----------------QLICVNENGGCEQYCSDH----------------------   19
1epi.pdb                1  N--------S-YPGCPSS----------------------Y-----DGYCLNGGVCMHIE   24
1esl.pdb                1  --------------------A-----------------------CTNTSCSGHGECVETI   17
1fsb.pdb                1  ------------------TAS-----------------------CQDMSCSKQGECLETI   19
1hcgb.pdb               1  -----------------------CSLDNGDCDQFCHEE----------------------   15
1hre.pdb                1  --G---TSH-LVKC-AE----------------------KE-----KTFCVNGGECFMVK   26
1ixa.pdb                1  --------------------------------------VD-GDQCESNPCLNGGSCKDDI   21
1rfnb.pdb               1  ---------------------MTCNIKNGRCEQFCKNS----------------------   17
1urk.pdb                1  ----QVPSN-C-------------------------------------DCLNGGTCVSNK   18
4tgf.pdb                1  -V----VSHF-NDC-PDS----------------------H-----TQFCFHG-TCRFLV   25
                                                                                       

1apo.pdb               22  -----------GDYTCTCAEGF---------EGKN-----------------CEFSTR--   42
1dan1.pdb              20  -----------QSYICFCLPAF---------EGRN-----------------CETHKD--   40
1dan2.pdb              20  T----GTKRSC-----RCHEGYSLLADGVSC---TPTVEYPCGKIPILE-----------   56
1epi.pdb               25  ----S-L----DSYTCNCVIGY---------SGDR-----------------CQTRDLRW   49
1esl.pdb               18  -----------NNYTCKCDPGF---------SGLK-----------------CEQIV---   37
1fsb.pdb               20  -----------GNYTCSCYPGF---------YGPE-----------------CEYVRE--   40
1hcgb.pdb              16  -----QNSVVC-----SCARGYTLADNGKAC---IPTGPYPCGKQTLER-----------   51
1hre.pdb               27  DLSNP------SRYLCKCQPGF---------TGAR-----------------CTENVPM-   53
1ixa.pdb               22  -----------NSYECWCPFGF---------EGKN-----------------CEL-----   39
1rfnb.pdb              18  A----DNKVVC-----SCTEGYRLAENQKSC---EPAVPFPCGRVSVSQTSK--------   57
1urk.pdb               19  Y----FS----NIHWCNCPKKF---------GGQH-----------------CEIDK---   41
4tgf.pdb               26  ----Q-E----DKPACVCHSGY---------VGAR-----------------CEHADLLA   50
                                            C                                          

1apo.pdb                   -----------------     
1dan1.pdb                  -----------------     
1dan2.pdb                  -----------------     
1epi.pdb               50  WEL--R-----------   53
1esl.pdb                   -----------------     
1fsb.pdb                   -----------------     
1hcgb.pdb                  -----------------     
1hre.pdb               54  ---KVQNQEKAEELYQK   67
1ixa.pdb                   -----------------     
1rfnb.pdb                  -----------------     
1urk.pdb                   -----------------     
4tgf.pdb                   -----------------     
                                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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