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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 07:07:54 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ghf7.html
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#====================================
# Aligned_structures: 4
#   1: 1cela.pdb
#   2: 1eg1a.pdb
#   3: 2a39a.pdb
#   4: 2ovwa.pdb
#
# Length:        456
# Identity:      106/456 ( 23.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    186/456 ( 40.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          106/456 ( 23.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1cela.pdb               1  SACTLQSETHPPLTWQKCSSGGTCTQQTGSVVIDANWRWTHAT--NSSTNCYD-GNTWSS   57
1eg1a.pdb               1  QPGTSTPEVHPKLTTYKCTKSGGCVAQDTSVVLDWNYRWMHDA---NYNSCTV-NGGVNT   56
2a39a.pdb               1  K-PGETKEVHPQLTTFRCTKRGGCKPATNFIVLDSLSHPIHRAEGLGPGGCGDWGNPPPK   59
2ovwa.pdb               1  T-PDKAKEQHPKLETYRCTKASGCKKQTNYIVADAGIHGIRQ---KNGAGCGDWGQKPNA   56
                                  E HP Ltt  Ctk ggC  qt   V D      h         C d g     

1cela.pdb              58  TLCPDNETCAKNCCLDGA---AYASTYGVTTSGNSLSIGFVT-QSA-QKN--VGARLYLM  110
1eg1a.pdb              57  TLCPDEATCGKNCFIEGV---DYAA-SGVTTSGSSLTMNQYM-PSSSGGYSSVSPRLYLL  111
2a39a.pdb              60  DVCPDVESCAKNCIMEGIP--DYSQ-YGVTTNGTSLRLQHILPD-----GRVPSPRVYLL  111
2ovwa.pdb              57  TACPDEASCAKNCILSGMDSNAYKN-AGITTSGNKLRLQQLI-N-----NQLVSPRVYLL  109
                           t CPD   CaKNC   G     Y    GvTTsG sL                vspR YLl

1cela.pdb             111  A-SDTTYQEFTLLGNEFSFDVDVSQLPCGLNGALYFVSMDADGGVSKYPTNTAGAKYGTG  169
1eg1a.pdb             112  D-SDGEYVMLKLNGQELSFDVDLSALPCGENGSLYLSQMDENGGA--NQYNTAGANYGSG  168
2a39a.pdb             112  DKTKRRYEMLHLTGFEFTFDVDATKLPCGMNSALYLSEMHPTGAK--SKYNPGGAYYGTG  169
2ovwa.pdb             110  EENKKKYEMLHLTGTEFSFDVEMEKLPCGMNGALYLSEMPQDGGKSTSRNSKAGAYYGAG  169
                                 Y ml L G EfsFDVd   LPCG NgaLYls M   Gg      n aGA YG G

1cela.pdb             170  YCDSQCPRDLKFINGQANVE-GWEPSSNNANTGIGGHGSCCSEMDIWEANSISEALTPHP  228
1eg1a.pdb             169  YCDAQCPV-QTWRNGTLNT-SH--------------QGFCCNEMDILEGNSRANALTPHS  212
2a39a.pdb             170  YCDAQCFV-TPFINGLGNI-EG--------------KGSCCNEMDIWEANSRASHVAPHT  213
2ovwa.pdb             170  YCDAQCYV-TPFINGVGNI-KG--------------QGVCCNELDIWEANSRATHIAPHP  213
                           YCDaQC v   fiNG  N   g               G CCnEmDIwEaNSra    PH 

1cela.pdb             229  CTTVGQEICEGDGCGGTYSDNRYGG-TCDPDGCDWNPYRLGNTSFYGPGSSFTLDTTKKL  287
1eg1a.pdb             213  CTA----------------------TACDSAGCGFNPYGSGYKSYYGPG--DTVDTSKTF  248
2a39a.pdb             214  CNKKGLYLCEGEECA------F-EG-VCDKNGCGWNNYRVNVTDYYGRGEEFKVNTLKPF  265
2ovwa.pdb             214  CSKPGLYGCTGDECG------S-SG-ICDKAGCGWNHNRINVTDFYGRGKQYKVDSTRKF  265
                           C                          CD  GCgwN yr   t  YG G    vdt k f

1cela.pdb             288  TVVTQFETSG---------AINRYYVQNGVTFQQPNAELGSY-SGNELNDDYCTAEEAEF  337
1eg1a.pdb             249  TIITQFNTD-NGSPSGNLVSITRKYQQNGVDIPSA-Q----P-GGDTISS--CP------  293
2a39a.pdb             266  TVVTQFLAN-R---RGKLEKIHRFYVQDGKVIESFYTNKEGVPYTNMIDDEFCE----AT  317
2ovwa.pdb             266  TVTSQFVAN-K---QGDLIELHRHYIQDNKVIESAVVNISGPPKINFINDKYCA----AT  317
                           Tv tQF              i R Y Q g  i s           n i d  C       

1cela.pdb             338  GGSSFSDKGGLTQFKKATSGGMVLVMSLWDDYYANMLWLDSTYPTNETSSTPGAVRGSCS  397
1eg1a.pdb             294  ---SASAYGGLATMGKALSSGMVLVFSIWNDNSQYMNWLDSG------------NAGPCS  338
2a39a.pdb             318  GSRKYMELGATQGMGEALTRGMVLAMSIWWDQGGNMEWLDHG------------EAGPCA  365
2ovwa.pdb             318  GANEYMRLGGTKQMGDAMSRGMVLAMSVWWSEGDFMAWLDQG------------VAGPCD  365
                                   Gg   mg A s GMVL mS W d    M WLD g             aGpC 

1cela.pdb             398  TSSGVPAQVESQSPNAKVTFSNIKFGPIGSTGNPSG  433
1eg1a.pdb             339  STEGNPSNILANNPNTHVVFSNIRWGDIGSTT----  370
2a39a.pdb             366  KGEGAPSNIVQVEPFPEVTYTNLRWGEIGSTY----  397
2ovwa.pdb             366  ATEGDPKNIVKVQPNPEVTFSNIRIGEIGSTS----  397
                             eG P ni    Pn  VtfsNir G IGST     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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