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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:24:55 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/gpr.html
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#====================================
# Aligned_structures: 3
#   1: 1f3g.pdb
#   2: 1gpr.pdb
#   3: 2gpr.pdb
#
# Length:        159
# Identity:       39/159 ( 24.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     99/159 ( 62.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/159 (  6.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1f3g.pdb                1  --------TIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKI   52
1gpr.pdb                1  EPLQNEIGEEVFVSPITGEIHPITDVPDQVFSGKMMGDGFAILPSEGIVVSPVRGKILNV   60
2gpr.pdb                1  --MWFFNKNLKVLAPCDGTIITLDEVEDEVFKERMLGDGFAINPKSNDFHAPVSGKLVTA   58
                                        aP  GeI  i dVpD VF ekm GDGfAI P  n  vaPV Gki   

1f3g.pdb               53  FETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEK  112
1gpr.pdb               61  FPTKHAIGLQSDGGREILIHFGIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVDLDAVKPN  120
2gpr.pdb               59  FPTKHAFGIQTKSGVEILLHIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVDLKSVAKK  118
                           FpTkHAfgiqsdsGvEil HfGiDTVsLkGeGF sfv egqrV  Gdkl evDL  v  k

1f3g.pdb              113  AKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRI-KK  150
1gpr.pdb              121  VPSLMTPIVFTNLAEGETVSIKASGSVNREQEDIVKIE-  158
2gpr.pdb              119  VPSIKSPIIFTNNGGKTLEIVKMGEVKQGDVVAILK---  154
                           vpS  tPivftN  e    i k g v  ge   I k   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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