################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 10:21:34 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/hip.html
################################################################################################
#====================================
# Aligned_structures: 5
#   1: 1ckua.pdb
#   2: 1hpi.pdb
#   3: 1isua.pdb
#   4: 2hipa.pdb
#   5: 3hipa.pdb
#
# Length:         92
# Identity:        8/ 92 (  8.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     17/ 92 ( 18.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           37/ 92 ( 40.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ckua.pdb               1  -SAPANAVAADDATAIALKYNQDATKSER-VAAARPGLPPEEQHCANCQFMQA-DAAGAT   57
1hpi.pdb                1  M----ERLSEDDPAAQALEYRHDASSVQ--HPAY-----EEGQTCLNCLLYTDAS----A   45
1isua.pdb               1  ------GTN--AAMRKAFNYQDTAK---------------NGKKCSGCAQFVP-G---AS   33
2hipa.pdb               1  E----PRAE--DGH--AHDYVNEAADAS-GHPRY-----QEGQLCENCAFWGE-A---VQ   42
3hipa.pdb               1  --VPANAVTESDPAAVALKYHRDAASSER-VAAARPGLPPEEQHCENCQFMNP-DSA-A-   54
                                      d    A  Y   A                e q C nC            

1ckua.pdb              58  D-EWKGCQL--FP-GKLINVNGWCASWTLKAG   85
1hpi.pdb               46  Q-DWGPCSV--FP-GKLVSANGWCTAWVAR--   71
1isua.pdb              34  PTAAGGCKV--IPGDNQIAPGGYCDAFIVKK-   62
2hipa.pdb              43  D-GWGRCTHPDFD-EVLVKAEGWCSVYAPAS-   71
3hipa.pdb              55  A-DWKGCQL--FP-GKLINLSGWCASWTLRAG   82
                              w  C    fp   l    GwC        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################