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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 10:34:57 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/hpr.html
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#====================================
# Aligned_structures: 5
#   1: 1pch.pdb
#   2: 1poh.pdb
#   3: 1ptf.pdb
#   4: 1zer.pdb
#   5: 2hid.pdb
#
# Length:        100
# Identity:       10/100 ( 10.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     27/100 ( 27.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/100 ( 25.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1pch.pdb                1  -AKFSAIITDKVGLHARPASVLAKEASK-FSSNITIIANEKQGNLKSIMNVMAMAIKTG-   57
1poh.pdb                1  MFQQEVTITAPNGLHTRPAAQFVKEAKG-FTSEITVTSNGKSASAKSLFKLQTLGLTQG-   58
1ptf.pdb                1  MEKKEFHIVAETGIHARPATLLVQTASK-FNSDINLEYKGKSVNLKSIMGVMSLGVGQG-   58
1zer.pdb                1  MEQNSYVIIDETGIHARP-ATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGK-D   58
2hid.pdb                1  -AQKTFKVTADSGIHARPATVLVQTASK-YDADVNLEYNGKTVNLKSIMGVVSLGIAKG-   57
                                  i    G HaRP       a   f s i    ngK  nlKSim v  lg     

1pch.pdb               58  TEITIQADGNDADQA----I-QAIKQTMIDTALIQG----   88
1poh.pdb               59  TVVTISAEGEDEQKA----V-EHLVKLMAELE--------   85
1ptf.pdb               59  SDVTITVDGADEAEG----M-AAIVETLQKEGLA------   87
1zer.pdb               59  AEITIYADGS-----DESDAIQAISDVLSK------EGLT   87
2hid.pdb               58  AEITISASGADENDA----L-NALEETMKSEGLGE-----   87
                              TI a G             a                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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