################################################################################################
# Program: MUSTANG v0.2: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, P. J. Stuckey, J. C. Whisstock, and A. M. Lesk
# Rundate: Tue Oct  4 16:45:35 2005
# Report_file: results.html
################################################################################################
#====================================
# Aligned_structures: 13
#   1: 3EST.pdb
#   2: 2PKA.pdb
#   3: 1TON.pdb
#   4: 3RP2.pdb
#   5: 4PTP.pdb
#   6: 5CHA.pdb
#   7: 1PPB.pdb
#   8: 1SGT.pdb
#   9: 1ARB.pdb
#  10: 2SGA.pdb
#  11: 3SGB.pdb
#  12: 2ALP.pdb
#  13: 2SNV.pdb
#
# Length:        421
# Identity:        5/421 (  1.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     11/421 (  2.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          302/421 ( 71.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


3EST.pdb                1  -----------------------------------------VVGGTEAQ-RNS-------   11
2PKA.pdb                1  -----------------------------------------IIGGRECE-KNS-------   11
1TON.pdb                1  -----------------------------------------IVGGYKCE-KNS-------   11
3RP2.pdb                1  -----------------------------------------IIGGVESI-PHS-------   11
4PTP.pdb                1  -----------------------------------------IVGGYTCG-ANT-------   11
5CHA.pdb                1  -----------CGVPAIQPV---------------------IVNGEEAV-PGS-------   20
1PPB.pdb                1  ---TFGSGEADCGLRPLF--EKKSLEDKTERELLESYIDGRIVEGSDAE-IGM-------   47
1SGT.pdb                1  -----------------------------------------VVGGTRAA-QGE-------   11
1ARB.pdb                1  GVS--------------------------------------GSCNIDVVCP--EGDGRRD   20
2SGA.pdb                   ------------------------------------------------------------     
3SGB.pdb                   ------------------------------------------------------------     
2ALP.pdb                   ------------------------------------------------------------     
2SNV.pdb                   ------------------------------------------------------------     
                                                                                       

3EST.pdb               12  ----WPSQISLQYRSGS-SW-AHTCGGTL-IR----Q--NWVMTAAHCV-----D-----   48
2PKA.pdb               12  ----HPWQVAIYHY-----S-SFQCGGVL-VN----P--KWVLTAAHCK-----N-----   44
1TON.pdb               12  ----QPWQVAVIN------E--YLCGGVL-ID----P--SWVITAAHCY-----S-----   42
3RP2.pdb               12  ----RPYMAHLDIVT--EKGLRVICGGFL-IS----R--QFVLTAAHCK-----G-----   48
4PTP.pdb               12  ----VPYQVSLNS------G-YHFCGGSL-IN----S--QWVVSAAHCY-----K-----   43
5CHA.pdb               21  ----WPWQVSLQDK----TG-FHFCGGSL-IN----E--NWVVTAAHCG-----------   53
1PPB.pdb               48  ----SPWQVMLFRKS---PQ-ELLCGASL-IS----D--RWVLTAAHCL-----L----Y   83
1SGT.pdb               12  ----FPFMVRLS----------MGCGGAL-YA----Q--DIVLTAAHCV-----SGSGN-   44
1ARB.pdb               21  I---IRAVGAYSKS----G--TLACTGSLVNNTAN-DRKMYFLTAHHCGMGTAST-----   65
2SGA.pdb                1  ---IA-GGEAITTG-------GSRCSLGFNVS---VNGVAHALTAGHCT-----N-----   36
3SGB.pdb                1  ---IS-GGDAIYSS-------TGRCSLGFNVR---SGSTYYFLTAGHCT-----D-----   36
2ALP.pdb                1  -ANIV-GGIEYSIN----N--ASLCSVGFSVT---RGATKGFVTAGHCG-----T-----   39
2SNV.pdb                1  ------RLFDVKNE----DG-DVIGHALAME--------GKVMKPLHVK-----------   30
                                                   c                   a Hc            

3EST.pdb               49  --------RELTFRVVV-GEH-----NLNQN---------N-GTEQYVGVQKIVVHPYWN   84
2PKA.pdb               45  ----------DNYEVWL-GRH-----NLFEN---------E-NTAQFFGVTADFPHPGFN   78
1TON.pdb               43  ----------NNYQVLL-GRN-----NLFKD---------E-PFAQRRLVRQSFRHPDYI   76
3RP2.pdb               49  ----------REITVIL-GAH-----DVRKR---------E-STQQKIKVEKQIIHESYN   82
4PTP.pdb               44  ----------SGIQVRL-GED-----NINVV---------E-GNEQFISASKSIVHPSYN   77
5CHA.pdb               54  ------V-T-TSDVVVA-GEF-----DQGSS---------S-EKIQKLKIAKVFKNSKYN   89
1PPB.pdb               84  PPWDKNFTE-NDLLVRI-GKH-----SRTRY---------ERNIEKISMLEKIYIHPRYN  127
1SGT.pdb               45  --------N-TSITATG-GVV-----DL--Q---------S-GAAVKVRSTKVLQAPGYN   77
1ARB.pdb               66  --------A-ASIVVYW-NYQNSTCRAPNTPASGANGDGSM-S--QTQSGSTVKA-T--Y  109
2SGA.pdb               37  ----------ISASWS------------------------------IGTRTGTSF-----   51
3SGB.pdb               37  ----------GATTWWA-NS------A-------------R-T-TVLGTTSGSSF-----   59
2ALP.pdb               40  ----------VNATARI-GG------------------------AVVGTFAARVF-----   59
2SNV.pdb               31  ------------GTIDHP--------V-------------L-------SKLKFTK-----   45
                                                                                       

3EST.pdb               85  -T------DDVAA-GYDIALLRLAQ-SVTLNS--Y---VQLGV--LPRAGT---ILA-NN  124
2PKA.pdb               79  LS---ADGKDY---SHDLMLLRLQS-PAKITD--A---VKVLE--LPT--Q---EPE-LG  118
1TON.pdb               77  -PLIP--VHDH---SNDLMLLHLSE-PADITG--G---VKVID--LPT--K---EPK-VG  116
3RP2.pdb               83  -S------VPN---LHDIMLLKLEK-KVELTP--A---VNVVP--LPSPSD---FIH-PG  120
4PTP.pdb               78  -S------NTL---NNDIMLIKLKS-AASLNS--R---VASIS--LPT--S---CAS-AG  113
5CHA.pdb               90  -S------LTI---NNDITLLKLST-AASFSQ--T---VSAVC--LPSASD---DFA-AG  127
1PPB.pdb              128  -W-----RENL---DRDIALMKLKK-PVAFSD--Y---IHPVC--LPDRETAASLLQ-AG  169
1SGT.pdb               78  -G--------T---GKDWALIKLAQ-PINQ---------PTLK--IAT--T---TAY-NQ  107
1ARB.pdb              110  ----------A---TSDFTLLELNN-AANPA-F-N---LFWAG--WD-------RRDQNY  141
2SGA.pdb               52  ----------P---NNDYGIIRHSN-PAAADGRVYLYNGSYQDITTA---G---NAF-VG   90
3SGB.pdb               60  ----------P---NNDYGIVRYTNTTIPKDGTVG-----GQDITSA---A---NAT-VG   94
2ALP.pdb               60  ----------P---GNDRAWVSLTS-AQTLLPRVAN-GSSFVTVRGS---T---EAA-VG   97
2SNV.pdb               46  ----------S--SAYDMEFAQLPV-NM---R--S----EAFT--YT---S---EHP-EG   74
                                           D                                           

3EST.pdb              125  SPCYITGWGLTRTN-----G-QLAQTLQQAYLPT--VDYAIC-----S--SSSYWGSTV-  168
2PKA.pdb              119  STCEASGWGSIEPGPDD--F-EFPDEIQCVQLTL--LQNTFC-----A--DA--HPDKV-  163
1TON.pdb              117  STCLASGWGSTNPS--E--M-VVSHDLQCVNIHL--LSNEKC-----IET-Y--KDNV--  159
3RP2.pdb              121  AMCWAAGWGKTGVR-----D-PTSYTLREVELRI--MDEKAC-----V--DY--R--YYE  161
4PTP.pdb              114  TQCLISGWGNTKSS--G--T-SYPDVLKCLKAPI--LSDSSC-----K--SA--YPGQI-  156
5CHA.pdb              128  TTCVTTGWGLTRY-------ANTPDRLQQASLPL--LSNTNC-----K--KY--WGTKI-  168
1PPB.pdb              170  YKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPI--VERPVC-----K--DS--TRIRI-  217
1SGT.pdb              108  GTFTVAGWGANREG-----G-SQQRYLLKANVPF--VSDAAC-----R--SA--YGNELV  150
1ARB.pdb              142  PGAIAIHHPN-------------VAEKRISNSTSPTSFV---A----W---G--G--GA-  173
2SGA.pdb               91  QAVQRSGST---------------T--GLRSGSV--TGL---NATVNY--GS--S--GI-  121
3SGB.pdb               95  MAVTRRGST---------------T--GTHSGSV--TAL---NATVNY--GG--G--DV-  125
2ALP.pdb               98  AAVCRSGRT---------------T--GYQCGTI--TAK---NVTANY--AE--G---A-  127
2SNV.pdb               75  FYNW-H----------------------HGAVQY--SGG---------------------   88
                                                                                       

3EST.pdb              169  KNSMVCAG-G--D----GVRSGCQGDSGGPLHCLV--NGQYAVHGVTSFVSRLG-C----  214
2PKA.pdb              164  TESMLCAG-YL-P----GGKDTCMGDSGGPLICN------GMWQGITSWGH--TPC----  205
1TON.pdb              160  TDVMLCAG-EM-E----GGKDTCAGDSGGPLICD------GVLQGITSGGA--TPC----  201
3RP2.pdb              162  YKFQVCVG-SP-T----TLRAAFMGDSGGPLLCA------GVAHGIVSYGH--P-D----  202
4PTP.pdb              157  TSNMFCAG-YL-E----GGKDSCQGDSGGPVVCS------GKLQGIVSWGS--G-C----  197
5CHA.pdb              169  KDAMICAG-A-------SGVSSCMGDSGGPLVCKK--NGAWTLVGIVSWGS--S-T----  211
1PPB.pdb              218  TDNMFCAG-YK-P-DEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE--G-C----  267
1SGT.pdb              151  ANEEICAG-YPDT----GGVDTCQGDSGGPMFRKD-NADEWIQVGIVSWGY--G-C----  197
1ARB.pdb              174  GTTHLNVQWQ---P---SGGVTEPGSSGSPIYSPE-----KRVLGQLHGGP--S------  214
2SGA.pdb              122  VYGMIQTN-----------VCAQPGDSGGSLFAG------STALGLTSGGS--G-N----  157
3SGB.pdb              126  VYGMIRTN-----------VCAEPGDSGGPLYSG------TRAIGLTSGGS--G-N----  161
2ALP.pdb              128  VRGLTQGN-----------ACMGRGDSGGSWITSA-----GQAQGVMSGGN--V-QSNGN  168
2SNV.pdb               89  ---RFTIP----------RGVGGRGDSGRPIMDNS-----GRVVAIVLGGA--D------  122
                                                   GdSG                g    g          

3EST.pdb              215  -N---VT-RKPTVFTRVSAYIS--W--------INNVIASN-------------------  240
2PKA.pdb              206  -G---SA-NKPSIYTKLIFYLD--W--------IDDTITEN------------------P  232
1TON.pdb              202  -A---KP-KTPAIYAKLIKFTS--W--------IKKVMKEN------------------P  228
3RP2.pdb              203  ------A-KPPAIFTRVSTYVP--W--------INAVIN---------------------  224
4PTP.pdb              198  -A---QK-NKPGVYTKVCNYVS--W--------IKQTIASN-------------------  223
5CHA.pdb              212  -C---ST-STPGVYARVTALVN--W--------VQQTLAAN-------------------  237
1PPB.pdb              268  -D---RD-GKYGFYTHVFRLKK--W--------IQKVIDQF------------------G  294
1SGT.pdb              198  -A---RP-GYPGVYTEVSTFAS--A--------IASAARTL-------------------  223
1ARB.pdb              215  SCSA-TGTNRSDQYGRVFTSWT--GGGAAASRL-SDWLDPASTGAQFIDG-LDS------  263
2SGA.pdb              158  -CR---T-GGTTFYQPVTEALS--A--------YG-------ATV-----L---------  181
3SGB.pdb              162  -CS---S-GGTTFFQPVTEALV--A--------YG-------VSV-----Y---------  185
2ALP.pdb              169  NCGIPAS-QRSSLFERLQPILS--Q--------YG-------LSL-----V-T-----G-  198
2SNV.pdb              123  -----EGTRTALSVVTWN---SKGK--------TI-------KTT-----PEG-TEEW--  151
                                                                                       

3EST.pdb                   -     
2PKA.pdb                   -     
1TON.pdb                   -     
3RP2.pdb                   -     
4PTP.pdb                   -     
5CHA.pdb                   -     
1PPB.pdb              295  E  295
1SGT.pdb                   -     
1ARB.pdb                   -     
2SGA.pdb                   -     
3SGB.pdb                   -     
2ALP.pdb                   -     
2SNV.pdb                   -     
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################