Tableau information
Concept source: d2vfoa_ amino acid (a.a.) range (SER114)(ASP479)
nSSEs in this Concept: 40
String of secondary struct.elems. (SSEs) defining this concept: HEHEEEEEEEEHHHEEEEEEEEEEEEEEEEEEEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER114) (LYS120) H1
(LYS122) (LEU127) E2
(LEU133) (ALA139) H3
(ASP142) (ARG148) E4
(ARG148) (GLY154) E5
(GLU156) (GLY161) E6
(VAL164) (LYS170) E7
(LYS170) (ASP176) E8
(LEU179) (LYS183) E9
(GLY187) (GLY192) E10
(GLY192) (SER197) E11
(ALA217) (ALA222) H12
(SER237) (PHE242) H13
(GLY244) (LEU249) H14
(GLY255) (SER260) E15
(LEU262) (GLU266) E16
(GLY269) (ARG274) E17
(ARG274) (LEU278) E18
(MET279) (PHE284) E19
(HIS288) (ASP294) E20
(ASN296) (LYS302) E21
(ILE306) (SER312) E22
(GLY318) (GLY324) E23
(GLY324) (TYR328) E24
(SER333) (ARG338) E25
(ARG338) (GLY342) E26
(GLY351) (ARG356) E27
(VAL362) (GLY367) E28
(SER374) (ASN378) E29
(ASN378) (ASP383) E30
(ASP383) (TYR388) E31
(GLY393) (GLY397) E32
(ASN425) (ASN430) E33
(ASN430) (GLY435) E34
(GLY440) (GLY445) E35
(GLY447) (ASN452) E36
(ASN452) (ASP457) E37
(GLY462) (LEU466) E38
(GLU469) (ASN474) E39
(ASN474) (ASP479) E40
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -87.4° E2
H3 -101.0° 164.5° H3
E4 85.8° -35.5° 156.8° E4
E5 -67.9° 59.7° -111.3° -91.8° E5
E6 -105.8° 157.2° -7.4° 160.0° -107.5° E6
E7 85.5° -56.6° 136.3° -21.2° -111.1° 141.2° E7
E8 -74.5° 36.0° -134.0° 69.2° -23.7° -129.1° -89.6° E8
E9 -101.8° 143.0° -22.6° 172.4° 90.5° -17.2° 158.4° 112.0° E9
E10 85.7° -51.7° 141.1° -16.2° -106.7° 145.8° 5.0° -84.8° 162.8° E10
E11 -83.8° 11.4° -155.8° 46.2° -48.3° -149.2° 67.3° -24.6° -133.3° 62.4° E11
H12 154.4° -95.3° 82.7° -81.9° -134.7° 80.9° 75.0° -121.0° 91.3° 76.3° -103.2° H12
H13 37.1° -78.6° 115.9° -58.3° -94.5° 123.1° -50.6° -88.3° 128.8° -52.1° -82.2° 118.6° H13
H14 145.6° -65.1° 110.8° 59.7° -110.2° 107.3° 62.5° -91.8° -112.7° 61.3° -72.7° -30.6° 113.1° H14
E15 126.2° -142.5° 37.8° -121.3° 142.6° 38.7° 104.8° 155.0° 54.4° 108.7° 149.3° 47.1° 116.7° 77.5° E15
E16 -88.3° 118.3° -49.9° 153.3° 61.9° -45.6° -172.2° 84.1° -28.6° -168.5° 107.2° -112.3° 124.4° -122.2° -82.7° E16
E17 84.0° -67.3° 126.0° -31.9° -119.9° 131.5° -10.8° -99.4° 148.5° -15.8° -77.8° 73.7° -47.2° 67.0° 97.1° -170.3° E17
E18 -86.9° -4.6° -168.4° 30.9° -63.7° 161.0° 52.1° -40.0° -147.5° 47.1° -15.7° -93.8° -75.5° 63.9° 140.8° -122.8° 62.8° E18
E19 -91.6° 130.9° -37.0° 166.1° 74.6° -33.0° -171.9° 97.0° -16.4° -176.2° 120.0° -105.4° 124.5° -121.8° -70.9° 12.9° -161.2° 135.5° E19
E20 82.9° -81.2° 112.5° -45.8° -130.9° 118.3° -24.8° -112.3° 135.1° -29.7° -91.6° 72.4° -46.2° 73.1° 86.5° 158.3° -13.9° -76.6° -147.3° E20
E21 -79.8° 32.7° -135.7° 67.1° -27.8° -130.2° 87.9° -5.7° -113.3° 83.1° 21.3° -115.3° -91.5° -86.2° -151.2° -86.2° 98.2° 37.0° -99.0° -111.5° E21
E22 -94.0° 88.7° -77.9° 124.2° 39.5° -72.1° 145.3° 57.3° -55.3° 140.4° 78.2° -111.6° 129.1° -105.1° -103.3° -30.4° 156.0° 93.3° -42.4° 169.6° 58.1° E22
E23 85.7° -82.1° 111.2° -46.6° -133.2° 116.8° -25.5° -113.9° 133.8° -30.4° -92.6° 69.5° -49.0° 71.0° 84.2° 158.5° -14.8° -77.5° 146.8° -2.9° -112.9° -170.8° E23
E24 -78.7° 8.8° -167.2° 35.8° -56.5° -161.1° 56.4° -33.4° -144.7° 51.6° -12.0° -103.2° -71.6° 73.2° 150.2° -117.5° 66.7° 9.4° -130.4° 80.2° -31.5° -89.4° -81.5° E24
E25 -90.0° 104.4° -63.1° 139.7° 50.1° -58.1° 160.6° 71.1° -40.9° 155.8° 93.5° -113.8° 127.0° -115.8° -93.1° -14.1° 169.9° 108.9° -26.5° -170.8° 72.7° 16.3° -172.1° 104.2° E25
E26 -79.8° -167.2° 24.8° -142.0° 114.3° 32.0° -121.8° 137.4° 42.0° -126.6° -160.2° 96.3° -91.1° 126.8° 49.5° 61.6° -111.1° -166.0° 50.1° -97.2° -142.0° 92.0° -97.0° -158.4° -75.7° E26
E27 -83.2° -11.1° -175.0° 25.2° -67.6° -167.7° 46.2° -44.4° -154.1° 41.3° -21.1° -94.7° -69.1° 65.8° 140.7° -128.2° 56.7° -6.9° -141.0° 70.5° -42.0° -99.3° 71.6° -11.1° -114.5° -160.2° E27
E28 -81.6° 64.6° -103.5° 99.4° 15.0° -98.3° 120.2° 30.8° -81.2° 115.4° 53.4° -122.6° 109.5° -102.8° -129.5° -53.9° 130.2° 69.1° -66.7° 142.9° 32.3° -26.8° 144.7° 63.8° -40.4° -112.8° 74.3° E28
E29 -75.5° -158.0° 37.1° -127.5° 123.4° 44.5° -107.3° -144.0° 56.3° -112.1° -159.1° 94.3° -79.4° 124.1° 50.8° 75.7° -96.6° -154.5° 64.6° -82.9° -149.6° 106.0° -82.8° -150.6° 89.7° 14.6° -147.8° -124.8° E29
E30 83.8° -88.8° 104.9° -53.4° -137.2° 110.8° -32.2° -119.6° 127.5° -37.2° -99.1° 70.8° -48.2° 75.8° 80.0° 151.4° -21.5° -84.2° 139.9° -7.6° -119.0° -176.7° -7.0° -87.8° 165.2° 90.0° -78.1° -150.0° -75.8° E30
E31 83.7° -15.8° 174.8° 20.1° -72.4° 169.9° 41.2° -49.3° -158.8° 36.3° -26.1° 92.1° -66.7° 64.1° 137.2° -133.2° 51.8° -11.3° -146.0° 65.6° -47.0° -104.2° 66.6° -15.9° -119.6° -157.6° -5.0° -79.3° -144.1° -73.2° E31
E32 -82.1° 94.8° -73.8° 129.4° 38.4° -69.3° 149.4° 60.2° -52.2° 144.9° 83.6° -122.8° 118.6° -118.7° -105.1° -23.9° 157.9° 99.3° -36.8° -164.7° 62.4° 13.6° -167.6° 93.6° -12.0° -83.3° 104.4° 30.2° -96.5° -165.3° 109.4° E32
E33 83.8° -90.8° 102.9° -55.4° -138.7° 108.8° -34.3° -121.5° 125.5° -39.2° -101.2° 70.7° -48.7° 76.7° 78.4° 149.5° -23.5° -86.2° 137.9° -9.6° -121.0° -177.8° -9.0° -89.8° 163.3° 88.0° -80.1° -151.8° 73.8° -2.0° -75.2° -164.6° E33
E34 85.6° -22.0° 168.9° 13.5° -79.3° 168.2° 34.6° -56.1° -164.2° 29.7° -32.8° 87.6° -64.7° 61.0° 131.3° -140.0° 45.3° -17.4° -152.8° 59.2° -53.8° -110.7° 60.1° -22.8° -126.2° -153.8° -11.8° -86.1° -139.6° 66.8° -6.9° -116.2° -68.8° E34
E35 -86.5° 108.3° -59.9° 143.2° 52.1° -55.4° 163.2° 74.1° -38.3° 158.8° 97.2° -116.5° 123.5° -120.6° -91.8° -10.1° 169.6° 112.8° -22.9° -165.4° 76.1° 21.3° -166.7° 107.4° 5.4° -71.0° 118.1° 43.8° -84.8° -159.9° 123.1° 13.9° -158.1° 129.9° E35
E36 96.4° -93.1° 98.8° -58.2° -147.9° 103.6° -37.6° -127.2° 120.8° -42.3° -104.2° 58.1° -61.3° 66.6° 69.4° 148.5° -28.1° -88.6° 135.7° -17.5° -125.3° 169.6° -15.0° -93.9° 161.7° 88.6° -83.3° -157.6° 75.4° -13.1° -78.3° 171.9° -12.6° -71.5° 158.6° E36
E37 85.7° -27.6° 164.1° 7.9° -84.5° 165.7° 29.0° -61.6° -168.7° 24.1° -38.3° 85.1° -61.9° 60.2° 127.3° -145.5° 39.8° -23.0° -158.3° 53.7° -59.3° -116.3° 54.5° -28.1° -131.8° 149.1° -17.3° -91.7° 134.6° 61.2° -12.3° -121.7° 63.2° -5.6° -135.5° 66.0° E37
E38 -87.2° 94.4° -73.3° 129.6° 40.2° -68.3° 150.4° 60.8° -51.1° 145.6° 83.4° -117.8° 123.5° -113.9° -102.6° -23.9° 160.0° 98.9° -36.6° 169.4° 62.5° 9.0° 172.2° 94.0° -10.2° -84.9° 104.4° 30.2° -98.5° -170.3° 109.4° -5.2° -169.4° 116.2° -14.0° 171.9° 121.7° E38
E39 95.6° -100.0° 92.1° -65.0° -153.2° 97.2° -44.2° -133.7° 114.3° -49.0° -111.1° 58.7° -62.4° 70.9° 64.2° 141.6° -34.4° -95.6° 128.8° -22.3° -132.1° 167.3° -20.2° -100.7° 155.2° 81.6° -90.2° -164.4° 68.5° -16.0° -85.2° 164.8° -14.7° -78.4° 151.7° -7.0° -72.8° 165.4° E39
E40 85.8° -26.9° 164.7° 8.5° -83.9° 166.0° 29.7° -61.0° -168.2° 24.7° -37.7° 85.4° -62.3° 60.2° 127.7° -144.9° 40.4° -22.4° -157.7° 54.3° -58.7° -115.7° 55.1° -27.5° -131.2° 149.7° -16.7° -91.0° 135.2° 61.9° -11.7° -121.1° 63.9° -5.0° -134.8° 66.6° 0.6° -121.1° 73.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vfqa_ : (ASP111) (ASP479) [view usage] : b.80.1.6 |Single-stranded right-handed beta-helix |Pectin lyase-like |P22 tailspike protein |P22 tailspike protein |Salmonella phage P22 [TaxId: 10754]
d2vfoa_ : (SER114) (ASP479) [view usage] : b.80.1.6 |Single-stranded right-handed beta-helix |Pectin lyase-like |P22 tailspike protein |P22 tailspike protein |Salmonella phage P22 [TaxId: 10754]
d2vfpa_ : (ASP111) (ASP479) [view usage] : b.80.1.6 |Single-stranded right-handed beta-helix |Pectin lyase-like |P22 tailspike protein |P22 tailspike protein |Salmonella phage P22 [TaxId: 10754]
d2vfma_ : (SER114) (ASP479) [view usage] : b.80.1.6 |Single-stranded right-handed beta-helix |Pectin lyase-like |P22 tailspike protein |P22 tailspike protein |Salmonella phage P22 [TaxId: 10754]
d2vfna_ : (SER114) (ASP479) [view usage] : b.80.1.6 |Single-stranded right-handed beta-helix |Pectin lyase-like |P22 tailspike protein |P22 tailspike protein |Salmonella phage P22 [TaxId: 10754]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80