Tableau information
Concept source: d1e2ra2 amino acid (a.a.) range (LYS140)(THR564)
nSSEs in this Concept: 40
String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEEEEEEEEEEEEEEEEEEHEEEHEEHEEEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS140) (TRP146) H1
(TRP146) (VAL150) E2
(LEU168) (ARG174) E3
(GLN178) (ASP183) E4
(LYS190) (GLY196) E5
(ILE201) (SER205) E6
(ARG209) (GLY215) E7
(GLY218) (ASP224) E8
(VAL233) (GLY239) E9
(ARG243) (SER248) E10
(TYR257) (TYR263) E11
(GLN267) (ASP272) E12
(LYS279) (ARG285) E13
(PRO296) (ALA305) E14
(PHE312) (GLU318) E15
(ILE322) (THR328) E16
(LEU333) (SER339) E17
(ARG342) (ASP346) E18
(ASP346) (SER352) E19
(ARG354) (ALA359) E20
(ASN364) (ASP370) E21
(ALA378) (GLY383) E22
(GLN385) (ARG391) E23
(ARG391) (VAL396) E24
(TRP404) (HIS408) E25
(ASP412) (GLY418) E26
(HIS424) (ALA428) H27
(LEU432) (LEU438) E28
(LEU443) (PRO449) E29
(LEU454) (LEU460) E30
(GLU463) (GLY468) H31
(GLY468) (ASP474) E32
(PRO485) (PRO491) E33
(PRO491) (GLY497) H34
(GLN502) (ASN511) E35
(THR515) (SER520) E36
(GLN527) (ASP535) E37
(LYS542) (GLU548) E38
(THR554) (ASN558) E39
(ASN558) (THR564) H40
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -28.1° E2
E3 114.7° 142.6° E3
E4 -58.2° -36.1° 156.3° E4
E5 145.2° 154.9° -43.6° 153.7° E5
E6 -79.1° -54.2° 148.2° -55.4° 108.7° E6
E7 121.2° 149.1° -11.9° 148.7° -44.4° 153.1° E7
E8 -40.8° -13.0° 154.3° -31.9° 148.0° -41.8° 162.0° E8
E9 152.0° -169.5° -41.7° 134.7° -35.3° 128.8° -32.5° 163.9° E9
E10 -80.0° -52.6° 158.7° -44.5° 115.6° 13.7° 158.2° -39.6° 127.3° E10
E11 118.4° 144.1° -22.0° 137.0° -54.0° 161.7° -11.7° 156.5° -33.7° 160.2° E11
E12 -45.4° -24.3° 145.7° -48.0° 131.8° -34.0° 157.3° -17.3° 162.1° -38.1° 161.8° E12
E13 134.3° 146.3° -48.4° 117.7° -58.8° 140.3° -36.6° 149.2° -23.9° 132.1° -29.3° 165.4° E13
E14 -47.0° -22.4° -157.8° -13.9° 158.5° 50.7° -156.0° 18.6° 148.6° 42.9° -145.1° -35.5° 130.7° E14
E15 123.6° 149.5° -21.7° 139.6° -49.2° -156.2° -10.0° 161.8° -28.6° -155.6° 5.5° 165.7° -27.2° 149.1° E15
E16 -65.4° -51.3° 127.8° -72.2° 104.3° -29.7° 138.5° -44.4° 137.4° -42.1° 149.8° -27.5° 160.2° -61.6° 148.1° E16
E17 112.1° 120.5° -64.7° 95.9° -84.5° 139.2° -53.8° 125.2° -49.7° 126.1° -42.7° 142.5° -25.8° 107.3° -44.0° 167.5° E17
E18 -10.1° 18.6° -124.6° 48.4° 153.6° 71.8° -130.4° 31.6° -158.9° 71.2° -126.3° 39.0° -137.3° 36.9° -131.7° -62.4° 112.8° E18
E19 -77.8° -51.3° -162.9° -23.2° 130.8° 41.5° -151.2° -41.4° 122.6° 28.0° 142.3° -51.4° 114.6° -30.9° 141.6° -67.0° 100.5° 67.7° E19
E20 103.1° 129.9° -23.1° 133.3° -64.4° -170.9° -20.3° 142.8° -49.1° -174.3° -15.5° 146.5° -42.5° 136.7° -20.6° 143.5° -48.4° 111.5° 147.5° E20
E21 -84.9° -60.8° 141.9° -61.8° 101.8° -7.0° 146.2° -48.6° 122.8° -18.3° 155.0° -39.5° 136.6° -57.6° 149.6° -30.1° 140.2° -78.0° -46.2° 165.0° E21
E22 75.6° 97.3° -59.2° 97.7° -100.7° 150.5° -56.3° 109.1° -77.7° 142.1° -47.4° 120.2° -59.3° 100.1° -52.7° 139.2° -44.3° 81.1° 116.9° -36.6° 157.4° E22
E23 -47.9° -32.1° 137.1° -57.9° 123.2° 34.8° -149.0° -27.1° 156.7° 42.4° -156.5° 9.9° 174.2° 45.4° -158.5° -19.3° 152.1° -43.6° 59.8° -142.9° 39.0° 123.5° E23
E24 -83.1° -63.0° -140.5° 26.9° 131.5° 66.2° -129.0° -57.7° 107.9° 52.6° 118.6° -72.0° 93.4° -40.8° 119.0° -91.4° 76.1° -73.9° -24.9° 122.6° -70.5° 95.6° -81.5° E24
E25 97.9° 125.8° -19.1° 139.4° -62.7° -159.4° -23.4° 138.6° -55.8° 173.0° -24.8° 137.3° -53.7° 138.7° -28.5° 130.9° -60.9° 107.2° 158.2° -12.6° 155.5° -42.1° 132.0° 134.0° E25
E26 -103.6° -76.2° 137.9° -61.6° 94.6° -27.4° 134.7° -63.2° 103.9° -23.7° 137.5° -60.2° 112.8° -64.2° 132.5° -54.7° 116.6° -94.8° -39.4° 153.0° -24.7° 153.0° -62.2° -58.0° 157.0° E26
H27 116.0° 139.2° 21.6° 174.0° -32.3° -127.0° 31.1° -145.0° -49.4° -138.9° 42.6° -130.0° -64.6° 161.6° 40.8° -107.5° -84.8° 125.9° -162.4° 44.0° -121.0° 78.6° -120.2° 157.2° 36.5° -123.3° H27
E28 52.2° 80.2° -63.0° 103.6° -102.6° 127.1° -69.1° 92.9° -101.1° 131.6° -67.9° 94.1° -92.5° 96.5° -72.8° 102.0° -84.3° 61.7° 126.5° -52.4° 130.8° -40.6° 92.3° 118.8° -45.7° 154.3° -70.5° E28
E29 -63.3° -35.5° -177.7° -21.8° 138.8° 33.6° 168.1° -24.2° 139.7° 23.6° 157.2° -33.9° 131.8° -19.9° 158.1° -53.0° 114.6° -53.4° 17.7° 154.9° -40.1° 118.7° -42.8° 39.1° 158.5° -44.4° -159.9° 114.9° E29
E30 103.4° 130.0° -15.7° 157.4° -48.3° -139.2° -27.5° 140.0° -56.0° 152.6° -36.4° 130.0° -64.1° 150.2° -37.1° 114.0° -78.4° 113.5° -178.6° -31.8° 134.4° -62.9° 121.5° -154.2° -21.4° 140.4° 17.1° -54.4° 163.7° E30
H31 -68.7° -44.1° 152.1° -50.5° 117.2° 10.4° 160.4° -32.1° 139.2° 17.5° 171.2° -23.6° 149.1° 43.4° 166.0° -25.8° 141.9° -61.4° 41.4° -168.2° -16.7° 141.2° -25.6° 66.1° -156.0° -37.0° -130.7° 117.3° 29.2° -139.6° H31
E32 -98.0° -72.3° 142.7° -40.4° 113.6° -51.8° 131.6° -62.4° 101.5° -38.9° 125.1° -71.0° 96.0° -51.1° 123.0° -81.0° 87.4° -88.0° -21.1° 135.4° -53.9° 117.2° -78.3° -23.8° 148.0° -35.9° 145.6° 141.8° -38.4° 157.5° -55.9° E32
E33 49.1° 73.3° -71.5° 107.2° -96.6° 103.8° -81.8° 83.1° -113.0° 113.3° -85.9° 76.5° -114.6° 95.0° -89.2° 75.2° -113.0° 58.8° 124.3° -72.1° 105.3° -70.3° 71.0° 131.9° -61.1° 130.0° -67.1° -29.8° 107.2° -57.0° 96.1° 145.4° E33
H34 26.1° 49.9° -93.8° 83.7° -119.1° 88.9° -103.2° 60.4° -135.4° 95.0° -104.8° 57.0° -130.8° 71.4° -109.1° 64.8° -118.9° 35.5° 101.1° -89.7° 92.5° -75.0° 54.1° 109.2° -80.6° 116.3° -90.7° 38.3° 84.6° -80.2° 79.4° 122.2° 23.6° H34
E35 -82.8° -55.5° 155.9° -46.9° 112.8° -13.3° 155.3° -42.5° 124.6° -3.0° 157.8° -40.4° 130.3° -45.8° 153.0° -42.6° 126.0° -74.1° 29.4° 172.9° -16.8° 144.6° -44.2° 53.7° -172.3° -20.8° -136.6° 134.2° 26.3° -151.1° 18.8° -38.6° 115.0° 97.3° E35
E36 105.2° 131.5° -15.6° 159.9° -46.0° 137.6° -27.4° 141.1° -54.9° 150.8° -37.0° 130.2° -64.0° 152.2° -37.2° 113.2° -79.3° 115.4° -176.8° -33.3° 132.5° -65.2° 121.5° -155.4° -23.4° 137.9° 14.6° -56.7° 164.1° -2.5° 138.6° 156.2° -58.4° -81.7° 149.1° E36
E37 -84.7° -59.5° 152.8° -27.0° 126.9° -49.8° 141.0° -50.6° 113.5° -36.1° 132.3° -61.5° 104.4° -37.9° 131.4° -76.7° 91.0° -74.6° -10.2° 138.8° -53.7° 112.2° -70.0° 17.0° 150.7° -41.9° -159.0° 129.6° -27.7° 168.5° -50.9° -13.5° 132.8° 109.2° -36.9° 168.1° E37
E38 89.4° 108.0° -48.2° 144.0° -55.8° 107.0° -59.9° 113.0° -81.2° 120.7° -69.9° 98.8° -95.8° 130.1° -69.8° 80.4° -112.0° 98.2° 147.4° -64.4° 103.4° -87.9° 89.4° 170.7° -52.5° 119.0° -32.0° -59.4° 132.1° -33.6° 106.1° 154.9° -41.7° -63.3° 120.0° -32.9° 156.7° E38
E39 -74.0° -46.2° 166.1° -37.3° 123.2° -18.7° 164.7° -33.2° 132.6° 7.5° 163.0° -34.6° 133.7° 35.4° 159.7° -44.0° 123.7° 64.8° 23.4° 170.3° -24.6° 134.7° -40.5° 48.3° 171.6° -30.3° -145.6° 126.1° 16.1° -157.5° 18.3° -38.2° 111.0° 91.0° -10.4° 156.1° -32.7° 124.2° E39
H40 -150.9° -123.7° 92.3° -101.0° 52.7° -72.0° 87.3° -110.7° 57.0° -71.1° 90.7° -105.9° 71.7° 108.6° 85.4° -90.0° 88.5° 142.3° 78.4° -105.9° 66.5° -130.8° -104.9° 82.3° -110.3° 47.5° -85.0° -155.0° 89.9° -100.7° 82.4° 61.2° -142.0° -151.8° 68.3° -98.4° 74.3° -102.0° 77.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bl9a2 : (PRO122) (HIS540) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Pseudomonas aeruginosa [TaxId: 287]
d1dy7a_ : (LYS140) (THR564) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d1aoma1 : (LYS140) (THR564) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d1dy7b2 : (LYS140) (THR564) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d1aofa2 : (MET139) (THR564) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d1e2ra2 : (LYS140) (THR564) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Paracoccus denitrificans [TaxId: 266]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70