Protein Concepts Dictionary

Tableau information

Concept source:  d3bnea1  amino acid (a.a.) range (SER336)(GLY811)

nSSEs in this Concept: 30

String of secondary struct.elems. (SSEs) defining this concept: HHHHEHEHHHEEEHHHHHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER336)  (THR342) H1
	  (THR342)  (ARG348) H2
	  (ARG348)  (GLY353) H3
	  (GLY353)  (VAL358) H4
	  (VAL358)  (GLU364) E5
	  (THR394)  (ARG402) H6
	  (ARG403)  (TYR409) E7
	  (TYR409)  (PHE413) H8
	  (PHE413)  (VAL417) H9
	  (VAL417)  (LEU423) H10
	  (ALA426)  (PHE436) E11
	  (THR442)  (LEU452) E12
	  (ALA461)  (PRO469) E13
	  (VAL474)  (LEU518) H14
	  (HIS522)  (ARG533) H15
	  (ASN535)  (SER545) H16
	  (GLY551)  (THR556) H17
	  (TYR562)  (LYS572) H18
	  (LEU581)  (GLY589) H19
	  (TYR608)  (TYR632) H20
	  (ASP636)  (ASP642) H21
	  (ASP642)  (GLY658) H22
	  (GLY658)  (LYS663) H23
	  (THR671)  (ASN694) H24
	  (GLY696)  (GLY702) H25
	  (THR720)  (HIS730) H26
	  (HIS730)  (ILE738) H27
	  (LYS741)  (THR756) H28
	  (SER776)  (ASP802) H29
	  (GLN806)  (GLY811) H30

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                                                                
H2      -69.9°   H2                                                                                                                                                                                                         
H3     -110.6°  -40.8°   H3                                                                                                                                                                                                  
H4       13.7°  -59.2°  -99.7°   H4                                                                                                                                                                                           
E5       37.8° -101.0° -138.8°   43.4°   E5                                                                                                                                                                                    
H6     -105.8°  -38.1°  -15.1°  -93.2° -126.9°   H6                                                                                                                                                                             
E7      -94.3°   76.2°   70.9°   99.0°  123.2°  -85.3°   E7                                                                                                                                                                      
H8      -78.5°   73.1°   79.2°   84.1°  107.8°  -92.0°   16.0°   H8                                                                                                                                                               
H9      -87.3°  113.9°  113.6°  -99.6°  -93.8°  128.5°   43.6°  -41.2°   H9                                                                                                                                                        
H10    -133.9°  123.1°   92.1° -145.8° -128.4°  104.7°   54.9°   66.8°  -46.6°   H10                                                                                                                                                
E11      84.2°  -94.4° -100.7°  -77.6°  -60.1°   85.9° -170.4° -161.3° -145.5°  131.6°   E11                                                                                                                                         
E12     -61.7°   80.9°   97.9°   70.4°   86.8° -108.7°  -36.4°  -21.5°  -35.9°  -76.3°  145.2°   E12                                                                                                                                  
E13    -115.9° -106.0°   90.3° -108.8°  -87.4°   79.4°  148.8°  164.7°  139.0°  103.0°  -31.7° -171.8°   E13                                                                                                                           
H14      89.3°   19.5°  -21.7°   78.0°  118.0°  -19.6°   75.8°   78.2°  118.6°  111.0°  -94.7°   91.7°  -96.1°   H14                                                                                                                    
H15    -115.1° -153.3°  125.4° -128.6°  -95.7°  136.3°  -77.2°  -82.1°  -43.7°  -33.7°  112.0°  -79.4°   95.4° -144.7°   H15                                                                                                             
H16     -80.6° -118.2°  123.6°  -93.6°  -83.6° -138.2°  -52.8°  -47.9°  -10.5°   53.8°  135.8°  -37.5°  135.8° -126.1°   43.2°   H16                                                                                                      
H17     -76.7° -145.1°  169.6°  -86.2°  -44.2°  157.6° -116.9° -110.2°  -73.4°  -87.6°   72.0°  -92.2°   79.6° -161.4°   53.9°  -64.1°   H17                                                                                               
H18      53.5°  -60.8°  -87.5°   42.2°   53.6°  -73.8°  132.3°  121.3°  140.6° -171.6°  -40.5°  112.0°  -68.7°  -70.4°  144.5° -132.5°   91.2°   H18                                                                                        
H19      55.1°  124.6°  163.3°   67.3°  -35.5° -160.4°   99.9°   88.7°  -60.9°  -93.6°  -87.1°   68.4° -103.6°  144.1°  -63.2°   50.4°  -26.8°   89.0°   H19                                                                                 
H20     -85.2°  -16.9°   27.1°  -73.3° -111.9°  -21.4°   81.4°   82.6°  123.6°  117.6°  -89.0°   94.4°  -93.1°    6.7°  151.4° -130.2° -154.8°  -63.7° -140.3°   H20                                                                          
H21     -94.3°  -77.9°   72.6°  -99.4° -122.3°   87.1°    1.8°  -15.8°  -41.8°   53.9° -172.2°  -35.6°  149.2°   77.5°  -75.6°  -51.1° -115.2° -133.5°  -98.4°   83.2°   H21                                                                   
H22     -78.5° -129.1°  137.9°  -92.2°  -73.0°  152.7°   67.4°   62.0°   24.3°   59.1° -121.3°  -48.8°  123.7°  139.9°   38.4°   14.6°  -49.5° -125.5°  -38.1°  143.2°  -65.7°   H22                                                            
H23      46.8°  -83.4° -112.9°   42.0°   30.0°  -99.0°  140.7°  125.1°  123.3° -153.3°  -37.6°  107.8°  -69.2°  -95.4°  119.8°  113.3°   66.1°  -25.4°   65.1°  -88.8° -140.9°  102.9°   H23                                                     
H24    -126.9° -149.1°  115.0° -140.5°  106.1°  124.9°  -76.7°  -84.6°  -50.4°  -26.0°  111.7°  -86.1°   90.0° -135.7°   11.9°   52.1°   62.8°  149.6°  -74.7°  141.9°   75.3°   49.4°  127.3°   H24                                              
H25     -94.4° -155.9°  147.5° -107.4°   73.3°  158.9°  -87.3°  -86.1°  -45.1°  -55.4°  102.3°  -75.5°   97.3° -162.9°  -22.7°   38.8°   33.9°  124.7°  -40.7° -168.6°  -85.5°  -26.8°   99.3°  -34.0°   H25                                       
H26    -135.4°  106.8°   79.6° -126.9° -106.6°   72.5°  129.0°  145.0°  129.7°   86.6°  -51.3°  162.6°  -19.9°   91.7°   88.0°  131.2°  -89.9°  -85.2° -116.3°   90.9°  129.3°  123.6°  -88.9°   79.6°   97.3°   H26                                
H27      70.3°  -18.4°  -43.7°   63.2°  106.6°  -47.7°   58.3°   54.8°   95.8°  108.8° -112.5°   64.3° -123.1°  -28.4° -135.5° -100.9°  145.7°   76.5°  119.7°  -30.1°  -59.9°  113.1°   96.3° -133.9° -139.6° -120.1°   H27                         
H28     100.0°   53.4°   46.6°   86.4° -103.2°   31.7°  117.0°  122.0°  160.2°  123.6°  -54.2°  134.2°  -53.1°   43.9°  141.5°  169.7° -126.1°  -51.4° -137.8°   40.2°  118.7° -175.5°  -73.3° -131.0° -150.4°  -54.7°   70.0°   H28                  
H29      94.9°  164.5° -154.5°  105.3°   63.7°  153.9° -109.0° -107.7°  -66.9°  -69.5°   80.6°  -94.8°   77.4° -173.3°  -36.4°   59.9°   19.6°  108.0°   41.0°  169.5° -107.3°  -46.5°   83.7°  -43.9°  -21.9°  -81.6°  158.2° -129.9°   H29           
H30    -111.0°  -87.4°  -70.8°  116.4°  134.9°  -85.9°  -17.4°  -32.7°   43.9°   38.9°  164.2°  -50.5°  133.0°  -81.8°  -66.1°   54.4°  114.4° -147.4°  104.7°  -88.3°   17.1°   67.8°  157.7°  -62.9°   81.2°  113.2°  -71.0° -116.6° -101.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fgoa1 :   (PRO330)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1fgta1 :   (PRO330)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d3bnca1 :   (SER336)  (ASP802)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d3pzwa2 :   (SER336)  (ASP802)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1y4ka1 :   (SER336)  (ASP802)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d3bnba1 :   (SER336)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1fgra1 :   (SER336)  (ASP802)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d3bnda1 :   (SER336)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1fgqa1 :   (SER336)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d3bnea1 :   (SER336)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1fgma1 :   (PRO330)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d4whaa2 :   (SER336)  (GLY811)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.119