Protein Concepts Dictionary

Tableau information

Concept source:  d1e55a_  amino acid (a.a.) range (SER51)(ALA501)

nSSEs in this Concept: 30

String of secondary struct.elems. (SSEs) defining this concept: HHEHHEHHEHHEHHHHEEHEHEEHHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER51)   (TYR80) H1
	   (TYR80)   (GLY91) H2
	   (ASP93)   (SER98) E3
	  (SER100)  (LEU105) H4
	  (ASN115)  (GLY133) H5
	  (GLU135)  (PHE141) E6
	  (GLN147)  (LYS152) H7
	  (LYS162)  (GLY180) H8
	  (LYS184)  (PHE189) E9
	  (ASP191)  (GLY203) H10
	  (ASN222)  (TYR249) H11
	  (ASP253)  (PRO267) E12
	  (PHE272)  (ILE284) H13
	  (ILE284)  (VAL294) H14
	  (PRO299)  (LEU305) H15
	  (LYS314)  (LYS320) H16
	  (ASN326)  (TYR332) E17
	  (THR334)  (ASN340) E18
	  (LEU351)  (TYR357) H19
	  (TYR357)  (VAL362) E20
	  (GLU384)  (GLY398) H21
	  (PRO401)  (GLU406) E22
	  (GLY408)  (THR414) E23
	  (PRO420)  (ASN426) H24
	  (TYR428)  (GLY448) H25
	  (GLN452)  (ALA456) E26
	  (THR470)  (GLY474) E27
	  (ILE475)  (ASP479) E28
	  (THR485)  (MET488) E29
	  (LYS489)  (ALA501) H30

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                                                                
H2      -69.8°   H2                                                                                                                                                                                                         
E3     -139.2°  148.1°   E3                                                                                                                                                                                                  
H4      -70.1° -131.8°  -69.8°   H4                                                                                                                                                                                           
H5       54.5°  -19.1° -166.1° -122.9°   H5                                                                                                                                                                                    
E6     -151.7°  134.5°  -13.7°  -81.6°  152.4°   E6                                                                                                                                                                             
H7      141.2° -114.2°  -37.1°   82.9° -133.0°  -28.5°   H7                                                                                                                                                                      
H8       15.4°  -67.1°  144.7°   80.5°  -49.1°  158.4°  156.6°   H8                                                                                                                                                               
E9     -172.1°  114.3°  -39.3° -109.0°  127.8°  -28.5°  -44.6°  158.4°   E9                                                                                                                                                        
H10    -149.4°  134.8°  -29.0°  -92.6°  142.8°  -27.6°  -54.9°  142.0°  -23.7°   H10                                                                                                                                                
H11     -22.6°  -74.8°  126.1°   58.0°  -65.2°  135.0°  118.7°  -37.9°  162.6°  150.3°   H11                                                                                                                                         
E12     137.4°   76.3°  -81.4° -150.8°   86.3°  -70.3°  -76.4°  124.6°  -42.2°  -58.7° -151.0°   E12                                                                                                                                  
H13     -60.6° -129.8°   79.0°   20.0° -114.9°   92.4°  100.3°   67.1°  115.9°   94.6°   56.5°  149.9°   H13                                                                                                                           
H14     -56.2°  -89.6°   98.5°   45.3°  -88.8°  103.6°   85.0°  -71.6°  129.1°  127.4°  -33.7° -149.2°  -57.2°   H14                                                                                                                    
H15    -152.4°  137.7°  -15.1°  -84.5°  152.4°  -10.9°  -39.1°  152.8°   24.6°   16.8° -141.3°   66.4°  -91.9° -112.4°   H15                                                                                                             
H16      42.4°  -49.8° -156.7°  109.1°   31.2° -159.9° -163.8°   29.1° -134.4°  132.5°   63.0°  -95.6°   93.5°  -95.7°  149.4°   H16                                                                                                      
E17     120.6°   91.3°  -82.8°  132.4°   90.8°  -78.5°  -98.2°  105.2°  -53.9°  -53.8°  143.1°  -34.8°  119.5°  176.0°   69.3°  -81.9°   E17                                                                                               
E18    -145.7°  -90.2°   58.3° -109.0° -109.1°   45.5°  -27.3° -154.3°   42.2°   63.0° -126.9°  -55.8°  127.4°  -97.7°   52.8° -137.5°   86.3°   E18                                                                                        
H19     100.3°  -38.1°  111.1°  130.4°  -57.1°   98.3°   76.2° -102.5°   86.3° -110.0°  -94.2°  -63.9°  145.2°   88.0°  104.5°  -87.7°  -95.2°  -52.9°   H19                                                                                 
E20      59.1°   71.9° -129.5° -108.0°   55.7° -133.8° -159.4°   43.8° -114.9° -106.2°   81.7°   86.7°  -88.5°  115.2° -122.8°   27.5°  -61.5°  141.7°  106.9°   E20                                                                          
H21     -84.1°  -90.8°   81.9°  -59.5°  -99.3°   81.8°   57.8°  -99.3°  102.3°  109.2°  -61.7°  121.9°  -77.5°  -29.6°  -92.3° -118.3°  154.2°   68.1°   71.4° -142.7°   H21                                                                   
E22     112.7°  117.9°  -69.1°  101.6°  110.7°  -71.9°  -99.4°  100.0°  -59.5°  -44.6°  131.1°  -62.5°   89.1°  146.2°   61.0°   88.9°  -30.9°  101.2° -125.7°  -61.8°  150.0°   E22                                                            
E23     116.3°  128.8°  -59.2°   92.9°  121.5°  -63.5°  -91.7°  105.5°  -55.8°  -37.2°  131.3°  -67.7°   82.7°  138.2°   52.6°   98.3°  -39.6°   98.0° -131.6°  -70.8°  139.1°   11.1°   E23                                                     
H24     -73.6°  -47.6°  117.5°  -95.6°  -58.8°  110.7°   82.2°  -83.1°  114.3°  134.9°  -59.8°  101.7° -107.5°  -50.8°  121.1°  -85.8°  131.9°   72.4°   37.8°  113.0°  -43.2°  162.8°  168.8°   H24                                              
H25     -78.8°  -59.8°  106.1°  -87.0°  -71.0°  100.7°   72.3°  -90.4°  109.1°  126.7°  -61.4°  105.7° -101.5°  -44.4°  111.4°  -97.0°  139.0°   67.0°   44.0°  124.4°  -31.4°  167.4°  163.9°  -12.4°   H25                                       
E26     109.7°  121.1°  -68.6°   97.0°  112.4°  -72.6° -100.6°   97.7°  -62.5°  -45.8°  127.1°  -67.4°   84.2°  141.4°   61.7°   88.9°  -35.7°  104.5° -130.6°  -61.5°  147.8°   -4.9°    9.4°  167.3°  171.5°   E26                                
E27     -26.8°  -53.0° -144.2°  -79.5°  -44.9°  148.2°  123.1°  -37.2°  160.9° -172.1°  -21.9°  129.2°  -78.0°  -45.9° -158.1°   51.9°  132.6° -119.3°   75.6°   76.8°  -66.6°  137.0°  142.5°  -46.9°  -53.2°  134.9°   E27                         
E28      97.7°  142.8°  -60.4°   68.4°  127.3°  -70.6°  -97.6°   91.5°  -74.9°  -51.8°  107.3°  -94.0°   56.5°  112.9°  -61.7°   97.0°  -64.3°  114.1° -157.8°  -71.8°  123.6°  -33.4°  -26.3° -163.8°  154.6°  -28.7°  124.1°   E28                  
E29     -82.6°  -28.3°  125.1° -120.7°  -45.3°  113.5°   88.2°  -86.2°  104.2°  127.9°  -76.7°   79.4° -130.7°  -75.6°  121.0°  -76.4°  106.9°  -68.4°   18.0°  100.1°  -66.4°  137.6°  146.0°  -25.2°  -35.4°  142.1°  -57.6°  170.0°   E29           
H30     -41.2°  -51.8°  135.1°  -80.3°  -50.0°  135.3°  108.5°  -52.4°  146.7° -162.9°  -29.0°  125.7°  -84.0°  -39.1° -146.1°   64.5°  140.7°  104.5°   65.2°   90.8°  -53.8° -152.0° -157.5°  -32.5°  -38.0° -150.1°  -15.2° -136.1°   47.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1e56a_ :    (ILE64)  (THR500)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d1v02e_ :    (SER52)  (GLY496)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Sorghum (Sorghum bicolor) [TaxId: 4558]
 d1e4na_ :    (SER51)  (ALA501)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d1e4la_ :    (SER51)  (ALA501)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d1hxja_ :    (SER46)  (THR495)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d1h49a_ :    (ILE64)  (ALA501)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d1v08a_ :    (ILE64)  (ALA501)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d1e55a_ :    (SER51)  (ALA501)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d1v02a_ :    (SER52)  (GLY496)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Sorghum (Sorghum bicolor) [TaxId: 4558]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1