Protein Concepts Dictionary

Tableau information

Concept source:  d2vjqa_  amino acid (a.a.) range (ILE8)(VAL382)

nSSEs in this Concept: 30

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHHHHEHHHEEHHHHHEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE8)   (PHE13) E1
	   (GLN17)   (GLY30) H2
	   (ASN32)   (ARG38) E3
	   (SER57)   (PHE63) H4
	   (ASN66)   (LYS75) E5
	   (THR76)   (ALA90) H6
	   (ASP91)   (ASN96) E7
	  (GLY100)  (MET105) H8
	  (THR108)  (LEU115) H9
	  (ARG118)  (VAL124) E10
	  (HIS131)  (LEU136) H11
	  (ASN141)  (GLY147) H12
	  (GLY148)  (THR153) H13
	  (ALA166)  (GLY191) H14
	  (GLN194)  (ALA199) E15
	  (ALA199)  (ARG209) H16
	  (ILE210)  (ARG220) H17
	  (TYR227)  (PRO232) H18
	  (GLN262)  (LYS268) E19
	  (SER278)  (ALA285) E20
	  (TRP289)  (MET295) H21
	  (LYS298)  (ASP304) H22
	  (ASP304)  (THR309) H23
	  (LEU317)  (ALA329) H24
	  (ASP332)  (GLY344) H25
	  (PRO346)  (SER352) E26
	  (SER352)  (HIS358) H27
	  (PRO360)  (GLY366) H28
	  (VAL369)  (ASP373) E29
	  (GLY377)  (VAL382) E30

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                                                                
H2     -159.0°   H2                                                                                                                                                                                                         
E3       -9.7° -152.9°   E3                                                                                                                                                                                                  
H4      151.4°  -43.6°  146.0°   H4                                                                                                                                                                                           
E5      -44.0°  134.8°  -36.6°  109.5°   E5                                                                                                                                                                                    
H6     -154.5°   44.5° -162.6°   37.3° -141.0°   H6                                                                                                                                                                             
E7      -29.9° -151.9°  -39.6°  152.6°  -70.8° -127.0°   E7                                                                                                                                                                      
H8       90.2°  -76.0°   80.7°  -82.9°   63.3° -114.3°  118.6°   H8                                                                                                                                                               
H9      144.3°  -18.3°  136.1°  -48.3°  118.0°  -61.0°  156.9°   57.7°   H9                                                                                                                                                        
E10     -44.8°  137.2°  -54.3°  147.0°  -86.4°  114.2°  -15.6°  129.8°  147.5°   E10                                                                                                                                                
H11     -69.2°  -89.9°  -65.4° -126.3°  -83.4°  129.7°   81.1°  -56.0°   79.1°   83.1°   H11                                                                                                                                         
H12     102.5°  -98.5°  107.2°   63.3°   93.9°  -56.7°   89.3° -130.6° -110.2°   87.5°  170.3°   H12                                                                                                                                  
H13     -85.0°   96.8°  -93.9°  116.3° -127.6°   79.0°  -56.8°  144.0°  111.1°  -41.2°   89.2°  -85.1°   H13                                                                                                                           
H14     134.2°  -51.4°  126.1°  -23.7°   90.2°  -60.7°  156.0°  -61.0°  -46.0°  164.0° -112.0°   77.2°  139.4°   H14                                                                                                                    
E15     -50.2°  131.4°  -59.6°  144.2°  -92.1°  109.7°  -21.3°  132.8°  142.4°   -5.8°   83.1°   87.7°  -35.5°  164.8°   E15                                                                                                             
H16    -119.8°   72.6° -129.5°   74.7° -145.4°   38.2°  -90.1° -148.5°  -90.9°  -76.3°  122.9°  -56.2°   42.7°   98.4°  -71.6°   H16                                                                                                      
H17      73.4° -127.1°   80.0°  -94.5°  -81.0°  -82.7°   58.2° -140.5° -141.1°   58.5°  139.2°  -31.3°   71.6° -105.5°   60.1°  -64.4°   H17                                                                                               
H18      76.5°  119.0°   85.6°  104.8° -101.2°  -78.2°   50.3°  164.4° -137.3°   42.5°  124.0°  -47.3°   44.2° -123.6°   41.3°  -46.7°   27.4°   H18                                                                                        
E19     -60.1°  102.6°  -61.9°  146.2°  -93.9°  125.1°  -57.8°   86.5°   99.4°  -55.1°   30.7° -141.1°  -60.3°  140.9°  -53.9°   99.9° -113.6°  -93.7°   E19                                                                                 
E20     120.1°  -80.5°  122.6°  -42.4°   99.1°  -44.3°  110.2° -115.2°  -90.0°  108.0° -168.7°   21.0°   97.8°  -57.1°  107.7°   59.9°   52.1°   66.5°  158.0°   E20                                                                          
H21     -71.4°   96.5°  -76.1°  137.2° -111.6°  106.6°  -57.6°  104.9°  100.1°  -48.5°   49.2° -124.4°  -40.0°  146.1°  -44.9°  -78.6° -103.4°  -78.8°   21.3° -137.5°   H21                                                                   
H22     100.8°  -95.5°   98.9°  -52.0°   68.4°  -73.0°  107.3°  -91.7°  -95.7°  114.1° -144.9°   39.3°  124.3°  -50.4°  117.1°  -91.6°   58.0°   83.0°  160.8°  -32.3°  161.5°   H22                                                            
H23      95.1°  -74.2°   85.4°  -74.1°   62.0° -107.9°  124.7°  -11.0°   56.4° -137.7°  -67.0°  119.8° -154.2°   51.3° -141.6°  145.1°  133.2°  160.3°  -97.4° -104.3°  115.8°  -81.1°   H23                                                     
H24    -101.5°   60.4° -101.1°  104.1° -123.1°   91.2°  -97.5°   77.3°   59.5°  -89.6°  -39.9°  142.6°  -68.8°  105.3°  -85.9°   86.9° -140.3° -112.9°  -42.2°  135.4°   41.2° -155.2°  -86.0°   H24                                              
H25     138.3°  -62.5°  140.7°  -28.8°  113.4°  -28.0°  124.6° -110.2°  -73.5°  118.5° -152.2°   36.8°   96.5°  -49.2°  116.6°   54.3°   67.7°   76.1°  152.2°   18.2°  131.8°  -45.0° -100.3°  118.0°   H25                                       
E26     -48.5°  110.9°  -42.3°  134.8°  -57.8°  154.5°  -69.8°   52.1°   96.2°  -78.2°   25.9° -148.7° -101.2°  112.9°  -80.8° -142.5° -121.9° -119.9°  -42.6°  156.3°  -63.8°  124.0°   61.7°  -65.8° -161.9°   E26                                
H27    -142.6°   21.6° -133.9°   47.2° -114.1°   62.9° -159.2°  -54.5°    4.1° -151.1°  -79.5°  110.0°  115.2°   42.9° -146.2°   94.1°  141.2°  140.1°  101.3°  -89.4°  103.2°  -93.1°  -52.7°   62.4°  -73.4°   95.1°   H27                         
H28    -119.2°  -60.5° -110.2°   41.9°   76.3°   78.5° -147.0°  -44.0°  -48.9° -162.3°  -98.3°   90.0°  155.8°   18.2° -168.1°  116.4°  114.1°  137.3° -128.9°   71.8°  142.5°  -56.0°  -33.7°  102.8°   66.7°  -95.3°  -44.9°   H28                  
E29     -65.5°   95.6°  -57.4°  114.2°  -58.9°  139.8°  -89.8°   31.7°   78.9°  -98.8°  -30.3°  151.3° -117.8°   92.7° -101.3° -152.4° -136.1° -140.1°  -57.5°  144.3°  -78.1°  114.6°   41.9°  -65.8° -142.0°  -20.6°  -77.1°  -75.5°   E29           
E30     107.5°  -93.6°  112.1°  -58.9°   97.5°  -52.0°   93.8° -129.4° -105.4°   91.2°  174.2°    5.0°   85.8°  -73.7°   91.1°   54.1°   35.9°   50.2°  143.6°   16.8° -125.6°  -39.4° -118.4°  139.4°   31.9° -153.3°  105.2°   87.5°  153.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vjpa_ :     (GLY7)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |Oxalobacter formigenes [TaxId: 847]
 d1p5ha_ :    (PHE13)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Formyl-CoA transferase |Oxalobacter formigenes [TaxId: 847]
 d2vjqa_ :     (ILE8)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |Oxalobacter formigenes [TaxId: 847]
 d2vjna_ :     (GLY7)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |Oxalobacter formigenes [TaxId: 847]
 d1t3za_ :     (GLY7)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Formyl-CoA transferase |Oxalobacter formigenes [TaxId: 847]
 d1vgra_ :     (GLY7)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Formyl-CoA transferase |Oxalobacter formigenes [TaxId: 847]
 d1vgqa_ :     (GLY7)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Formyl-CoA transferase |Oxalobacter formigenes [TaxId: 847]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.123