Tableau information
Concept source: d2v0ha2 amino acid (a.a.) range (PHE260)(THR439)
nSSEs in this Concept: 29
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEEEEEEEEEEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE260) (GLY264) E1
(GLY264) (HIS268) E2
(VAL272) (VAL276) E3
(ASN277) (GLY282) E4
(ASN283) (GLY287) E5
(ARG289) (GLY293) E6
(GLY295) (ASN300) E7
(ASN300) (GLY304) E8
(ASP306) (LYS310) E9
(TYR312) (ASP317) E10
(ASP317) (GLY321) E11
(LYS323) (PHE329) E12
(PHE329) (PRO334) E13
(ALA336) (ALA340) E14
(GLU341) (GLY345) E15
(PHE347) (LYS352) E16
(LYS352) (GLY356) E17
(GLY358) (HIS363) E18
(LEU364) (ASP369) E19
(ASP369) (SER374) E20
(ASN375) (GLY379) E21
(ALA380) (CYS385) E22
(LYS392) (GLY398) E23
(ASP400) (GLY404) E24
(ASP406) (PRO412) E25
(PRO412) (ALA416) E26
(GLY418) (GLY422) E27
(GLY424) (THR428) E28
(ASN434) (THR439) E29
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 108.9° E2
E3 119.5° -130.9° E3
E4 -6.0° 103.7° -125.0° E4
E5 -118.7° -11.0° 120.3° 113.8° E5
E6 113.7° -131.7° -14.4° 119.7° 120.7° E6
E7 -12.8° 97.2° -131.7° -6.8° 107.5° 126.5° E7
E8 -109.4° -4.6° 129.4° -104.5° 9.3° 128.8° -98.3° E8
E9 117.2° -128.7° -13.2° 123.1° -117.7° 3.5° 130.0° 126.0° E9
E10 -9.0° 101.1° -127.7° -3.0° 111.3° -122.6° 4.0° 102.1° 126.1° E10
E11 -108.9° -4.5° 129.9° -104.0° 9.8° 129.3° -97.7° 0.5° 126.4° -101.5° E11
E12 111.8° -137.2° -9.0° 117.5° -126.3° -9.2° 124.3° -135.0° -10.3° 120.3° 135.5° E12
E13 -6.7° 109.9° -119.1° 7.2° 120.2° -115.1° 12.7° 111.0° -118.5° 9.1° 110.5° -112.0° E13
E14 -108.9° 9.9° 131.6° -103.3° 17.5° 135.5° -96.5° 14.5° 132.2° -100.5° 14.5° 139.2° -108.7° E14
E15 117.1° -130.0° -10.4° 123.0° -119.1° 4.5° 129.9° -127.5° -2.9° 125.9° -128.0° 8.0° 118.1° -133.0° E15
E16 -11.3° 100.0° -129.0° -5.4° 110.4° -124.5° 3.3° 101.2° -128.0° -2.7° 100.7° -121.8° -9.9° 99.0° 127.7° E16
E17 -107.0° 5.4° 131.6° -102.1° 11.7° 130.6° -95.9° 2.5° 127.8° -99.6° 2.0° 137.0° -108.6° -15.2° 129.5° -98.8° E17
E18 117.1° -131.4° -7.1° 122.9° -120.5° 7.3° 129.7° -129.2° -6.4° 125.7° -129.7° 5.8° 117.6° -133.7° -3.5° 127.3° 131.3° E18
E19 -8.7° 102.6° -126.4° -3.3° 112.9° -121.8° 5.4° 103.7° -125.2° 2.2° 103.1° -119.1° -7.3° 101.7° -125.0° 2.7° 101.3° -124.6° E19
E20 -112.9° -4.5° 127.3° -107.6° 9.0° 129.1° -101.0° -7.5° 125.9° -104.9° -7.7° 134.0° -113.6° -8.6° 127.1° -103.8° -9.3° 128.3° -106.3° E20
E21 118.4° -125.2° 17.5° 124.4° -114.3° 6.6° 131.2° -122.2° 4.8° 127.4° -122.7° 15.1° 120.3° -129.5° 7.6° 129.4° -124.0° 11.1° 126.7° 122.8° E21
E22 28.4° 136.4° -91.1° 34.2° 145.0° -85.8° 41.0° 136.1° -89.2° 37.0° 135.6° -83.4° 29.4° 137.3° -88.9° 38.8° 133.6° -88.7° 36.0° 140.6° 90.9° E22
E23 -108.9° -1.8° 130.5° -103.8° 10.3° 130.7° -97.5° 2.8° 127.8° -101.3° 2.7° 136.5° -110.2° -11.8° 129.2° -100.3° -3.7° 130.7° -102.8° 5.6° 124.2° 136.1° E23
E24 122.1° -120.9° 19.5° 128.1° -110.0° 10.8° 134.8° -118.0° 8.4° 131.1° -118.5° 18.6° 124.3° -125.3° 10.8° 133.2° -119.8° 13.9° 130.6° -118.5° 4.3° 94.9° 119.9° E24
E25 5.1° 112.5° -116.3° 8.9° 122.6° -111.7° 15.3° 113.3° -115.1° 11.4° 112.8° -109.0° 3.9° 111.8° -114.8° 12.9° 110.9° -114.5° 10.2° 116.3° -116.8° -25.9° 112.7° 120.7° E25
E26 -106.2° 2.9° 133.3° -101.1° 13.0° 133.3° -94.7° 4.6° 130.4° -98.6° 4.2° 139.2° -107.4° -11.6° 131.9° -97.6° 3.9° 133.4° -100.1° 7.5° 126.8° -133.6° 2.7° 122.5° 110.0° E26
E27 126.1° -117.1° 20.8° 132.2° -106.2° 14.5° 138.9° -114.3° 11.7° 135.1° -114.8° 21.6° 128.4° -121.2° 13.6° 137.3° -116.2° 16.3° 134.6° -114.6° 8.3° 99.0° -116.2° 4.1° 124.8° 118.8° E27
E28 3.5° 111.9° -116.2° 9.5° 121.5° -110.2° 16.3° 112.2° -113.7° 12.5° 111.7° -108.4° 8.6° 112.2° -113.7° 14.8° 109.8° -113.7° 12.2° 115.9° -114.9° -25.1° 111.8° -118.6° 5.5° 109.2° 122.6° E28
E29 116.8° -128.0° 15.2° 122.8° -117.1° 3.7° 129.6° -125.2° 2.0° 125.8° -125.6° 11.9° 118.4° -132.0° 4.8° 127.7° -126.9° 8.4° 125.0° -125.4° -3.2° 89.0° -127.1° -7.2° 114.9° -129.6° -10.9° 113.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1g97a1 : (VAL252) (ARG439) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4fcea2 : (PHE260) (SER439) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 214092]
d1hm0a1 : (VAL252) (ARG439) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2oi6b1 : (PHE260) (ARG440) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Escherichia coli [TaxId: 562]
d2v0ja2 : (PHE260) (THR439) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Haemophilus influenzae [TaxId: 727]
d1hv9a1 : (PHE260) (ARG440) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Escherichia coli [TaxId: 562]
d3st8a2 : (THR272) (ALA451) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2jf2a_ : (ALA6) (GLY196) [view usage] : b.81.1.1 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |UDP N-acetylglucosamine acyltransferase |UDP N-acetylglucosamine acyltransferase |Escherichia coli, gene lpxA [TaxId: 562]
d4k6ra2 : (THR272) (ALA451) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3spta2 : (THR272) (ALA451) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1j2za_ : (SER2) (GLY192) [view usage] : b.81.1.1 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |UDP N-acetylglucosamine acyltransferase |UDP N-acetylglucosamine acyltransferase |Helicobacter pylori [TaxId: 210]
d1g95a1 : (VAL252) (ARG439) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2v0ha2 : (PHE260) (THR439) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Haemophilus influenzae [TaxId: 727]
d1hm8a1 : (VAL252) (ARG439) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2oi6a1 : (PHE260) (ARG440) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Escherichia coli [TaxId: 562]
d1lxaa_ : (SER5) (GLY196) [view usage] : b.81.1.1 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |UDP N-acetylglucosamine acyltransferase |UDP N-acetylglucosamine acyltransferase |Escherichia coli, gene lpxA [TaxId: 562]
d2v0ia2 : (PHE260) (THR439) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Haemophilus influenzae [TaxId: 727]
d3t57a_ : (SER44) (GLY244) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.81