Protein Concepts Dictionary

Tableau information

Concept source:  d3p8ia_  amino acid (a.a.) range (THR7)(ASP360)

nSSEs in this Concept: 28

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEHEEEEHEHHHEHEHEHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR7)   (GLY12) E1
	   (VAL14)   (ASN18) E2
	   (ALA23)   (LEU28) E3
	   (PRO39)   (ALA49) H4
	   (GLY52)   (SER56) E5
	   (GLU57)   (SER62) E6
	   (ALA71)   (HIS75) E7
	   (SER76)   (ASP94) H8
	   (GLY95)  (ARG106) E9
	  (GLN117)  (ALA122) E10
	  (ASN128)  (ARG134) E11
	  (ILE141)  (GLU152) E12
	  (GLU152)  (GLY174) H13
	  (ASP176)  (SER182) E14
	  (LEU187)  (SER193) H15
	  (SER206)  (ARG212) H16
	  (LEU213)  (TRP225) H17
	  (ARG229)  (SER235) E18
	  (GLU250)  (GLY264) H19
	  (ALA266)  (GLU272) E20
	  (SER282)  (PHE293) H21
	  (VAL296)  (GLY301) E22
	  (THR304)  (GLY315) H23
	  (ASP318)  (ARG324) E24
	  (ARG324)  (ASN329) H25
	  (LEU332)  (LYS338) H26
	  (ARG346)  (GLY352) H27
	  (ALA355)  (ASP360) H28

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                                                  
E2      158.2°   E2                                                                                                                                                                                           
E3      -69.4°  101.9°   E3                                                                                                                                                                                    
H4     -127.7°   61.9°  162.9°   H4                                                                                                                                                                             
E5       49.2° -114.6°  -27.6°  162.0°   E5                                                                                                                                                                      
E6       -6.7° -155.4°  -62.8° -134.4°   43.3°   E6                                                                                                                                                               
E7      -40.1°  159.8°   95.6°  -99.4°  -85.5°  -44.2°   E7                                                                                                                                                        
H8     -146.4°   51.8°  138.2°  -27.2°  163.7° -151.9° -108.1°   H8                                                                                                                                                 
E9       56.2° -102.1°  -58.0°  128.0°  -34.1°  -53.8°  -95.6°  146.9°   E9                                                                                                                                          
E10      96.3°  -85.1° -157.9°  -34.9°  130.7°  102.8°   82.3°  -62.0° -100.1°   E10                                                                                                                                  
E11     -97.2°   96.8°  -64.8°  109.2°  -88.5°  -93.5°  -81.6°   84.7° -122.2°  135.8°   E11                                                                                                                           
E12      36.1° -143.7°  105.3°  -91.7°   82.4°   42.7°   35.0° -113.9°  -73.5°  -61.1°  116.3°   E12                                                                                                                    
H13    -127.2°   73.8°  103.9°  -67.4°  130.0°  126.8°   92.4°  -43.0°  160.8°  -98.2°   42.1° -121.0°   H13                                                                                                             
E14      77.4°  -81.2°  -77.3°  104.2°  -58.3°  -76.8° -112.7°  121.0°  -26.0°  -83.2° -140.8°  -81.9°  154.7°   E14                                                                                                      
H15      79.5°  -87.2° -116.0°   71.2°  -91.3°   83.4°  -94.1°  -96.5°   58.1°  -42.7° -175.7°  -59.4° -138.6°  -41.3°   H15                                                                                               
H16     -89.4°  102.8°   57.2° -118.0°   79.8°   85.3°  -78.3°  -93.8°  113.8° -142.2°   -9.1°  112.0°   51.1°  134.3°  168.7°   H16                                                                                        
H17     -91.7°  109.5°   97.8°  -83.4°  113.4°   92.3°   57.5°  -69.1°  143.8°  -99.5°   38.4°   90.1°  -35.8°  169.0° -138.5°  -42.9°   H17                                                                                 
E18     105.0°  -53.2°  -79.6°   93.5°  -72.7° -103.2° -141.6°   99.9°  -49.4°  -88.4°  127.6° -109.1°  125.9°  -28.9°  -56.2°  126.1°  160.7°   E18                                                                          
H19      75.4° -126.3°   98.7°  -87.7°  106.4°   77.0°   39.6°  -80.5°  130.6°   93.5°  -50.4°   72.4°  -53.3°  152.1°  125.8°  -51.8°  -18.0°  178.0°   H19                                                                   
E20    -115.1°   43.6°  -73.2°   95.9°  -74.2° -111.8° -154.7°   94.7°  -59.2°  -99.5°  112.1° -125.0°  112.0°  -43.4°  -71.9°  111.7°  144.9°  -16.3°  161.9°   E20                                                            
H21      50.1° -151.7°   92.0° -100.3°   88.9°   52.5°   15.1° -102.0°  106.2°   91.1°  -67.0°   50.1°  -79.0°  126.3°  108.8°  -64.4°  -43.4°  154.9°  -25.8°  163.1°   H21                                                     
E22    -113.3°   48.6°  -58.6°  108.1°  -66.1° -108.3° -151.6°   99.8°  -61.8° -116.7°   95.8° -134.4°  104.6°  -53.9°  -88.0°   94.6°  131.8°  -31.9°  146.1°  -17.5°  150.5°   E22                                              
H23      67.4° -120.7°  136.4°  -60.7°  114.9°   74.0°  -45.1°  -81.4°  100.9°   37.1° -114.9°   32.5°  -97.1°   98.9°   61.4° -116.1°  -77.7°  117.4°  -64.7°  132.1°  -54.9°  149.2°   H23                                       
E24     -97.3°   72.9°  -29.1°  134.2°  -49.8°  -90.8°  123.7°  114.0°  -67.3° -150.9°   67.3°  132.1°   93.8°  -74.9° -115.6°   63.5°  105.6°  -63.3°  114.7°  -51.4°  117.2°  -34.2°  164.6°   E24                                
H25    -115.6°   79.4°  -74.8°   95.4° -101.4° -111.9°   95.8°   69.0° -132.3°  127.3°   18.4°  130.7°   29.1° -141.6°  164.5°  -26.8°   42.9° -118.9°  -59.3°  102.7°  -80.7°   88.9° -119.5°  -67.9°   H25                         
H26     144.4°   38.4°  140.2°   24.8°  144.6° -150.3° -124.0°  -31.4°  115.7°  -48.8°  112.9° -109.9°  -73.1°   89.7°  -69.4° -121.8° -100.1°   71.9° -109.0°   71.7° -124.9°   83.3°  -82.4°  111.3°   95.1°   H26                  
H27     -22.1°  170.9°  -69.4° -126.4°  -58.8°  -22.2°   27.2° -133.2°  -75.8°  103.9°  -77.4°   44.6°  105.2°  -98.9°  -98.9°   70.6°   70.2° -125.2°   54.8° -132.1°   31.3° -124.5°  -68.4°   98.3°   95.4° -150.4°   H27           
H28    -119.5°   77.2° -154.1°   24.3° -168.1° -125.3°  -82.6°  -26.9°  147.8°   47.7°  -89.5°  -88.0°  -50.7°  127.3°   89.8°  -97.5°  -59.5°  117.4°  -63.8°  117.3°  -79.5°  125.8°  -55.8°  139.0°   79.7°   46.1° -109.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3p8ia_ :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
 d1vypx_ :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
 d3p74a_ :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
 d1gvoa_ :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
 d2abba1 :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
 d1vyra_ :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
 d3p67a_ :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
 d1gvra_ :     (THR7)  (ASP360)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1