Protein Concepts Dictionary

Tableau information

Concept source:  d1g5aa2  amino acid (a.a.) range (ASP111)(TYR485)

nSSEs in this Concept: 26

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEEHEHEHEHHEEHHEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP111)  (GLY126) H1
	  (THR128)  (MET133) E2
	  (ILE162)  (GLY176) H3
	  (GLY176)  (PHE185) E4
	  (HIS192)  (GLY201) H5
	  (TYR209)  (PRO213) E6
	  (MET217)  (ARG223) H7
	  (GLY236)  (GLU241) E8
	  (GLY243)  (TRP247) E9
	  (TRP263)  (LEU278) H10
	  (ASP281)  (ALA287) E11
	  (GLN304)  (ILE318) H12
	  (ALA322)  (ILE330) E13
	  (HIS332)  (GLN338) H14
	  (GLN346)  (PRO351) E15
	  (PRO351)  (THR363) H16
	  (ASN367)  (HIS377) H17
	  (HIS382)  (TYR388) E18
	  (ASP394)  (ALA400) E19
	  (ALA400)  (GLY408) H20
	  (TYR412)  (ASN424) H21
	  (ARG432)  (GLN437) E22
	  (ASP444)  (THR450) E23
	  (THR450)  (GLY456) H24
	  (ALA464)  (LEU476) H25
	  (LEU481)  (TYR485) E26

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                                    
E2      145.0°   E2                                                                                                                                                                             
H3      -12.2°  157.1°   H3                                                                                                                                                                      
E4      126.9°  -28.2° -137.7°   E4                                                                                                                                                               
H5      126.4°  -36.6° -135.3°  -11.9°   H5                                                                                                                                                        
E6      123.7°  -22.3°  135.8°   18.7°  -30.6°   E6                                                                                                                                                 
H7       11.6° -138.5°   19.6°  126.8°  129.3° -119.3°   H7                                                                                                                                          
E8      167.3°   43.2°  157.4°  -64.8°  -66.1°  -65.5° -159.3°   E8                                                                                                                                   
E9      -22.8° -164.8°  -13.0°  138.4°  132.3°  142.6°   32.2°  151.3°   E9                                                                                                                            
H10     -67.4°  133.4°  -58.1°  161.6°  166.1°  146.7°  -64.5°  100.1°  -59.5°   H10                                                                                                                    
E11     105.9°  -39.8°  118.1°  -28.9°  -38.9°   17.8° -101.9°  -83.1° -125.4°  145.7°   E11                                                                                                             
H12     -88.4°  126.2°  -76.3°  137.8°  129.4°  147.8°  -92.6°   83.2°  -68.2°  -42.6°  165.5°   H12                                                                                                      
E13      91.2°  -54.8°  102.7°  -54.1°  -64.7°  -38.2°  -83.7°   93.6° -113.8°  120.4°  -25.9°  160.9°   E13                                                                                               
H14     -98.7°  114.5°  -87.7°  114.6°  104.3°  130.2°  107.0°  -78.0°   76.0°  -69.4°  143.2°  -27.0°  168.4°   H14                                                                                        
E15      86.6°  -66.3°   95.3°  -76.2°  -87.8°  -58.0°  -76.1°   92.5° -108.2°   94.9°  -50.8°  134.8°  -26.3°  159.5°   E15                                                                                 
H16      66.8°  -89.4°   73.7°  -98.1° -109.2°  -80.5°  -55.5°  109.1°  -86.6°   76.3°  -70.6°  118.8°  -44.7° -145.7°  -23.3°   H16                                                                          
H17     -94.2°  107.7°  -87.6°   93.5°   81.7°  112.2°  105.5°  -89.4°  -74.7°  -96.8°  117.4°  -57.7°  141.3°  -32.5°  167.5° -161.0°   H17                                                                   
E18     103.8°  -63.0°  107.8°  -85.1°  -96.6°  -67.3°  -92.3°   70.5° -119.6°   79.7°  -69.2°  110.4°  -51.3°  130.6°  -29.7°  -38.8°  158.5°   E18                                                            
E19     -51.8°  109.3°  -58.6°   81.7°   76.9°   89.6°   59.5° -140.6°  -56.6° -115.9°   76.3° -112.1°   82.2°  -99.2°  -99.6°  -95.3°   71.5° -129.2°   E19                                                     
H20      36.8° -110.4°   47.4° -103.4° -109.8°  -92.3°  -28.0°  142.9°   59.5°  -82.2°  -75.8° -118.4°  -55.7°  135.0°  -50.6°  -35.0°  127.3°  -73.6°   62.4°   H20                                              
H21     103.6°  -91.7°   97.2° -119.9° -126.6° -107.9°   96.3°  -64.0°  100.9°   41.8° -116.3°   61.0° -100.7°   82.9°   76.6°   71.5° -115.1°  -49.4°  155.4°   98.8°   H21                                       
E22    -124.4°   53.8° -128.3°   34.2°   22.4°   52.9° -132.3°   67.7° -120.1°  152.0°  -60.5°  109.5°  -86.4°   83.1° -110.2° -131.0°   59.3°  116.6°  -72.9° -123.2° -131.5°   E22                                
E23      84.7° -119.2°   75.0° -146.6° -148.7° -137.3°   81.8°  -82.9°   74.9°   17.3° -144.9°  -36.8°  124.2°  -63.2°   97.9°   84.0°  -94.5°   75.8°  131.4°   97.2°   29.6°  139.4°   E23                         
H24      56.6°   90.8°  -67.2°   87.3°   95.8°   73.9°  -47.8°  124.8°  -79.3°  -93.9°   58.6° -134.7°   36.2° -154.8°   32.9°  -25.8° -141.5°   60.0°  -70.5°  -19.9°   97.2° -113.9°  105.7°   H24                  
H25     -85.6°  107.8°  -81.9°   87.2°   75.5°  105.6°   97.1° -100.8°   70.0° -106.6°  106.2°  -71.8°  127.2°  -48.4°  152.1°  149.1°  -16.7° -170.3°   55.2°  114.1° -131.3°   54.6° -108.0°  125.7°   H25           
E26     124.6°  -49.6°  127.1°  -76.3°  -86.1°  -61.6° -113.1°   49.3° -137.5°   85.9°  -70.2°  103.9°  -61.1°  116.5°  -46.9°  -59.9°  138.1°  -21.3° -143.3°  -94.5°  -46.6°  102.1°  -76.2°  -79.4°  149.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4flsa1 :   (PRO120)  (TYR485)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
 d1g5aa2 :   (ASP111)  (TYR485)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylosucrase |Neisseria polysaccharea [TaxId: 489]
 d4flra1 :   (ASP111)  (TYR485)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
 d1mvya2 :   (ASP111)  (TYR485)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylosucrase |Neisseria polysaccharea [TaxId: 489]
 d4floa1 :   (ASP111)  (TYR485)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1