Protein Concepts Dictionary

Tableau information

Concept source:  d3slhd_  amino acid (a.a.) range (GLY13)(GLU284)

nSSEs in this Concept: 26

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEEHEHHEEEEHEHEEEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY13)   (GLY19) E1
	   (LYS21)   (ALA27) H2
	   (VAL28)   (ALA34) H3
	   (GLY36)   (GLY42) E4
	   (GLY46)   (GLY60) H5
	   (SER62)   (ILE66) E6
	   (ASN70)   (GLU75) E7
	   (SER94)  (GLN108) H8
	  (ASN111)  (ASP117) E9
	  (ASP117)  (ARG123) H10
	  (MET125)  (GLY136) H11
	  (GLY136)  (ASP140) E12
	  (PRO147)  (ARG155) E13
	  (ARG155)  (HIS160) E14
	  (HIS160)  (MET165) E15
	  (SER167)  (GLY178) H16
	  (LYS184)  (PRO190) E17
	  (THR197)  (HIS205) H18
	  (THR207)  (LYS212) E19
	  (GLN213)  (GLY219) E20
	  (GLY221)  (ASP227) E21
	  (ASP227)  (GLY232) E22
	  (ASP233)  (ILE246) H23
	  (SER250)  (ARG256) E24
	  (GLY265)  (GLY274) H25
	  (ASP276)  (GLU284) E26

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                                    
H2      -34.3°   H2                                                                                                                                                                             
H3      -44.0°   11.4°   H3                                                                                                                                                                      
E4     -148.3° -166.1° -164.6°   E4                                                                                                                                                               
H5       27.5°   -7.6°  -18.9° -163.9°   H5                                                                                                                                                        
E6     -166.5°  142.9°  136.1°  -29.0° -147.8°   E6                                                                                                                                                 
E7       26.8°   17.0°  -20.7°  174.5°   16.8°  156.5°   E7                                                                                                                                          
H8      -25.9°  -21.8°  -25.1°  170.4°  -21.1°  159.8°   -4.9°   H8                                                                                                                                   
E9     -149.0°  159.6°  158.8°   -6.6°  158.4°  -25.5°  174.5° -174.6°   E9                                                                                                                            
H10     -62.6°  -82.6°  -83.4°  110.5°  -80.7°  129.1°  -65.6°  -60.8°  117.0°   H10                                                                                                                    
H11     -36.8°  -28.4°  -26.5°  165.4°  -30.3°  151.8°  -14.1°  -11.7°  171.3°  -57.0°   H11                                                                                                             
E12     105.2°  114.3°  122.0°  -53.9°  110.0°  -62.5°  125.1°  127.5°  -49.4° -131.0° -139.1°   E12                                                                                                      
E13     -59.3°  -45.3°  -37.6°  146.0°  -49.9°  130.9°  -35.8°  -34.4°  149.6°   56.9°   22.8°  159.5°   E13                                                                                               
E14     129.4° -142.9° -135.9°   50.5° -144.9°   61.8° -128.1° -123.9°  -56.5°   67.4°  115.0° -102.0°  -98.5°   E14                                                                                        
E15     137.2°  150.7°  155.3°  -16.7°  147.2°  -34.6°  161.9°  162.9°  -12.7°  120.0°  173.5°   37.3° -162.3°  -66.3°   E15                                                                                 
H16     -41.8°  -10.8°   -2.9° -167.4°  -17.9°  138.8°  -17.9°  -22.2°  161.8°  -80.6°  -23.7°  123.5°  -36.1° -134.5°  157.7°   H16                                                                          
E17     138.7°  172.7° -171.0°   19.1°  166.0°  -44.3° -156.7°  151.9°  -25.7°   91.4°  147.2°  -66.9°  133.6°   35.1°  -32.3° -169.6°   E17                                                                   
H18     -70.8°  -37.4°  -26.9°  139.5°  -45.0°  110.6°  -46.0°  -49.3°  135.7°  -97.3°  -45.2°  124.6°  -40.8° -123.5°  140.0°  -29.0° -148.4°   H18                                                            
E19     110.1°  138.9°  140.2°  -53.6°  135.3°  -76.9°  122.2°  117.3°  -60.1°   56.9°  113.7°  -90.6°  107.0°   28.1°  -64.2°  137.4°  -34.6° -144.1°   E19                                                     
E20     -47.2°   22.9°   27.9° -143.2°  -23.8°  124.8°   39.5°  -44.2°  136.7° -104.5°  -51.2°   94.2°  -65.5° -163.4°  128.6°  -29.6°  160.8°   41.3°  157.3°   E20                                              
E21    -148.8° -119.0° -112.7°   52.0° -124.1°   23.9° -133.4° -137.5°   47.2°  146.0° -133.4°  -66.8° -118.4°   81.4°  -52.6° -115.5°  -68.2°   88.7° -100.4° -102.0°   E21                                       
E22     129.7° -161.1° -172.5°  -19.7°  153.7°  -48.6°  154.8°  151.2°  -24.0°   96.6°  153.0°  -52.8°  147.0°   49.8°  -23.4° -171.3°   15.8°  159.2°   41.2° -146.7°  -71.2°   E22                                
H23     153.1° -172.4° -162.7°   11.2° -174.9°  -29.5° -168.2°  163.8°  -16.5°  103.6°  154.8°  -65.1°  134.8°   40.1°  -27.9°  164.5°  -14.9°  135.9°  -48.0°  151.9°   53.4°   24.2°   H23                         
E24     -38.2°   13.1°    9.5°  173.1°   18.3°  144.2°  -12.4°  -16.2°  168.2°  -74.0°  -17.3°  127.4°  -32.2° -130.1°  163.4°    6.6° -164.3°  -33.6° -130.9°   34.8°  121.4° -167.2° -165.6°   E24                  
H25     144.2° -166.6° -157.5°   26.7°  168.0°  -43.1° -151.6°  147.1°  -32.8°   87.5°  138.7°  -79.1°  121.4°   23.8°  -42.7°  156.9°  -13.8°  136.3°  -34.3°  167.9°   66.1°   29.5°   16.7° -153.5°   H25           
E26     -52.7°  -20.9°   -9.5°  157.9°  -28.4°  128.9°  -27.6°  -31.2°  153.6°  -85.0°  -29.0°  127.2°  -33.4° -129.7°  154.9°  -11.0° -162.9°   18.4° -139.9°   33.7°  106.4°  177.5°  153.5°  -15.2° -149.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3slha_ :    (GLY13)  (THR280)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
 d3slhd_ :    (GLY13)  (GLU284)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
 d3slhc_ :    (GLY13)  (LYS285)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
 d3slhb_ :    (GLY13)  (THR280)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.68