Tableau information
Concept source: d1vaha2 amino acid (a.a.) range (THR11)(VAL401)
nSSEs in this Concept: 26
String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHHHHEHHEHEHHEHHEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR11) (PHE17) E1
(TRP21) (GLY36) H2
(GLY38) (SER43) E3
(PRO57) (GLN63) H4
(GLU76) (GLY90) H5
(GLY90) (ASN100) E6
(SER132) (ASN137) H7
(ASN137) (CYS141) H8
(ASP153) (ASP159) H9
(LYS172) (ILE189) H10
(ALA192) (ALA198) E11
(ALA198) (TRP203) H12
(TRP203) (LEU214) H13
(PHE229) (GLU233) E14
(LYS243) (GLY251) H15
(GLY251) (PHE256) E16
(PHE256) (LYS268) H17
(LYS273) (ASN279) H18
(ALA292) (VAL296) E19
(ASN298) (GLY304) H20
(ALA318) (ALA330) H21
(PHE335) (SER341) E22
(ASP353) (ILE358) H23
(GLU369) (ASN373) E24
(THR376) (ASN380) E25
(TRP388) (VAL401) H26
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 154.2° H2
E3 -25.1° 158.7° E3
H4 108.8° -96.9° 91.1° H4
H5 156.0° -4.9° -163.7° -95.0° H5
E6 -53.1° 134.3° -28.9° -78.9° -138.4° E6
H7 -125.1° 40.0° -118.8° 108.7° 44.9° -97.8° H7
H8 -86.7° 83.0° -75.8° 110.1° 87.9° -57.3° 43.0° H8
H9 65.1° -117.3° 82.1° -90.9° -112.9° -108.3° 150.0° -149.4° H9
H10 109.7° -59.1° 134.5° 113.3° -55.7° 162.5° -90.1° -124.3° 60.8° H10
E11 -55.3° 117.8° -40.9° -103.5° 122.7° -27.8° -77.9° -34.9° 120.3° 143.1° E11
H12 96.8° -105.0° 73.1° -29.8° -105.5° 52.6° 96.3° 82.5° -111.1° -142.2° 74.4° H12
H13 106.2° -83.3° 117.9° 70.8° -78.4° 134.7° -123.3° -166.3° 41.7° -47.3° 158.8° 100.4° H13
E14 -50.5° 115.0° -44.8° -119.5° 119.7° -41.7° -76.4° -36.3° 114.0° 127.1° -16.2° -90.6° 155.6° E14
H15 108.8° -86.2° 114.6° 57.3° -81.3° 125.1° 125.0° 162.2° -48.3° -59.7° 152.4° 86.8° -13.5° 158.6° H15
E16 -64.8° 90.5° -75.7° -159.1° 93.9° -81.9° -65.8° -51.4° 103.0° 87.2° -56.0° -129.3° 129.6° -40.4° 143.0° E16
H17 -88.4° 65.9° -102.9° 161.6° 68.4° -107.7° -54.0° -63.0° 102.8° 64.7° -80.4° -144.7° 111.6° -66.2° -124.4° -27.5° H17
H18 122.8° -82.9° 106.8° 15.9° -80.4° 94.0° 101.9° 115.4° -90.9° -99.7° 116.8° 42.5° -61.9° 133.0° -48.9° 166.1° -148.8° H18
E19 -54.7° 100.2° -75.6° 161.3° 101.4° -94.3° -89.4° -79.7° 74.5° 70.0° -75.1° -146.9° 103.5° -59.1° 116.2° -28.7° -37.2° -164.8° E19
H20 -54.7° 102.2° -62.3° -146.5° 106.0° -68.0° -72.0° -46.7° 104.1° 100.1° -43.1° -117.4° 138.2° 27.0° 150.4° -14.2° -41.5° 159.3° -34.7° H20
H21 144.7° -61.0° 125.5° 36.0° -59.0° 105.9° 81.7° 105.7° -104.3° -90.7° 121.2° 53.8° -66.6° 135.5° -56.6° 147.4° 126.8° -22.2° -158.8° 151.4° H21
E22 -28.3° 129.8° -53.2° 129.6° 129.8° -79.8° -119.2° -95.4° 54.2° 82.7° -73.6° 124.6° 94.0° -62.1° 102.4° -53.6° -68.9° 138.9° -31.8° -50.6° -157.9° E22
H23 94.5° -102.0° -98.7° 54.3° 97.2° -111.1° 140.2° -163.8° -40.3° 70.4° -137.3° -81.4° 23.8° -143.0° 15.9° 142.8° 133.2° -51.0° 114.0° 143.8° -64.8° 93.2° H23
E24 118.3° 37.3° 137.1° -131.6° 37.9° 139.2° 51.5° 84.1° -98.6° -40.8° 111.6° -141.4° -85.5° 99.5° -95.7° 62.2° 34.7° -116.1° 63.6° 76.2° -96.1° 92.5° -109.3° E24
E25 24.3° -161.0° -2.2° 90.3° -165.9° -30.5° -121.0° -78.0° 80.0° 133.2° -43.2° 73.3° 115.7° -46.8° 112.4° -77.1° -104.1° 105.9° -75.9° -63.8° 125.2° -52.5° 96.5° 138.0° E25
H26 148.7° -56.6° 126.8° -40.6° -55.2° 104.2° 74.3° 98.3° -111.9° -93.0° 116.3° -53.8° -73.3° 129.7° -63.9° 140.0° 121.4° -28.5° 156.6° 143.7° -7.8° -165.7° -72.6° -93.0° 126.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kgwa2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Human (Homo sapiens) [TaxId: 9606]
d1jxka2 : (THR11) (VAL396) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Human (Homo sapiens) [TaxId: 9606]
d1xgza2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kgxa2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Human (Homo sapiens) [TaxId: 9606]
d3dhpa2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hx0a2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Pig (Sus scrofa) [TaxId: 9823]
d1kbba2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Human (Homo sapiens) [TaxId: 9606]
d3l2la1 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Pig (Sus scrofa) [TaxId: 9823]
d1vaha2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Pig (Sus scrofa) [TaxId: 9823]
d1jfha2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Pig (Sus scrofa) [TaxId: 9823]
d1osea2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Pig (Sus scrofa) [TaxId: 9823]
d1ppia2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Pig (Sus scrofa) [TaxId: 9823]
d1pifa2 : (THR11) (VAL401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Pig (Sus scrofa) [TaxId: 9823]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1