Protein Concepts Dictionary

Tableau information

Concept source:  d2c5eb_  amino acid (a.a.) range (ILE30)(SER355)

nSSEs in this Concept: 26

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHHEHHHEEHEEHEEHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE30)   (GLY34) E1
	   (ALA40)   (GLY51) H2
	   (TYR53)   (TRP59) E3
	   (ASP72)   (LEU76) E4
	   (MET82)   (VAL88) H5
	   (ASP93)   (LEU98) E6
	  (MET105)  (ASN111) H7
	  (ASN111)  (ASN133) H8
	  (LYS136)  (ALA141) E9
	  (PRO148)  (LEU153) H10
	  (LYS161)  (PRO167) H11
	  (ALA173)  (GLY193) H12
	  (GLU195)  (ARG200) E13
	  (HIS202)  (PRO207) E14
	  (ALA218)  (THR228) H15
	  (ASP231)  (TRP236) E16
	  (GLN241)  (PHE247) E17
	  (ILE248)  (SER261) H18
	  (GLU265)  (GLY270) E19
	  (ASP272)  (SER276) E20
	  (MET277)  (GLU289) H21
	  (PRO293)  (PRO298) E22
	  (ARG304)  (ASN310) E23
	  (ASN310)  (LYS316) H24
	  (ARG324)  (GLY347) H25
	  (VAL350)  (SER355) H26

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                                    
H2     -159.2°   H2                                                                                                                                                                             
E3      -19.9° -162.5°   E3                                                                                                                                                                      
E4      -35.0°  154.3°  -15.2°   E4                                                                                                                                                               
H5      140.9°   25.7°  159.9°  172.9°   H5                                                                                                                                                        
E6      -16.5°  151.9°  -35.2°  -49.6°  127.9°   E6                                                                                                                                                 
H7       80.2° -115.8°   60.9°   45.9° -138.9°  -92.2°   H7                                                                                                                                          
H8      168.9°   24.0°  150.3°  135.8°  -47.1° -174.4°  -92.4°   H8                                                                                                                                   
E9      -25.2°  143.1°  -44.4°  -58.9°  118.6°   -9.3° -101.1°  165.3°   E9                                                                                                                            
H10     -63.2°  106.0°  -82.8°  -97.3°   80.6°  -47.8° -136.2°  126.8°  -38.5°   H10                                                                                                                    
H11      59.7° -133.6°   40.0°   24.8° -158.9°   73.3°  -21.4° -111.8°   82.5°  120.4°   H11                                                                                                             
H12     162.4°  -36.2°  142.8°  127.6°  -56.6° -167.3°   82.2°  -13.2° -165.6°  132.3° -102.9°   H12                                                                                                      
E13     -31.7°  136.8°  -51.1°  -65.5°  112.1°  -16.0° -107.3°  158.6°   -6.6°  -31.8°   89.1° -161.1°   E13                                                                                               
E14     -88.0°   71.6°  -96.9° -105.1°   67.8°  -89.1°  129.3°   90.4°  -85.6°  -75.1° -117.5°  103.3°  -83.5°   E14                                                                                        
H15     -51.2°  108.3°  -67.1°  -80.9°   93.0°  -47.8° -125.1°  130.6°  -43.5°  -44.8°  104.0°  143.8°   41.7°  -42.0°   H15                                                                                 
E16     109.5°  -90.4°   92.7°   78.9° -107.2°  115.9°   35.5°  -66.9° -122.4° -138.2°   56.2°  -54.2° -126.3°  146.5°  159.8°   E16                                                                          
E17    -140.3°   22.7° -140.2° -136.7°   39.8° -142.6°  113.8°   36.5° -137.5°  109.8° -124.5°   49.5° -133.4°  -53.8°  -94.9°  100.1°   E17                                                                   
H18     137.3°  -62.6°  119.7°  105.1°  -80.4°  142.6°  -59.4°  -39.4°  147.2°  140.7°  -80.9°  -26.4°  148.9° -127.2° -169.2°  -27.9°   74.6°   H18                                                            
E19     -55.6°  106.0°  -74.3°  -89.3°   85.7°  -46.5° -135.1°  130.0°  -39.4°  -28.9°  113.8°  141.8°  -35.1°   50.6°   16.3° -161.4°   98.4°  164.9°   E19                                                     
E20      -9.2°  150.1°  -27.5°  -42.6°  132.7°  -16.1°  -88.4°  167.4°  -22.3°  -57.9°   67.4° -169.7°  -28.0°   79.5°   42.0° -118.6°  132.7° -146.4°   47.0°   E20                                              
H21     -92.4°   66.9° -105.2° -115.8°   57.1°  -89.2° -144.2°   88.9°  -83.6°   64.7° -131.4°  102.0°  -80.0°  -14.9°  -41.8°  153.7°   53.9°  128.1°   45.0°   83.3°   H21                                       
E22      90.7° -105.8°   71.5°   56.5° -128.3°  102.3°   10.6°  -82.2° -111.0° -143.9°  -32.0°  -71.7° -117.0°  131.8°  135.1°  -26.4°  106.2°  -48.9°  145.7°  -98.9°  145.9°   E22                                
E23    -169.4°  -16.8°  170.7°  155.5°  -29.0° -153.6°  110.0°   20.8° -144.5°  106.3° -130.8°   27.9° -138.0°  -87.5° -120.8°   79.2°   39.1°   51.7° -114.6° -161.6°   81.0°   99.4°   E23                         
H24    -166.3°  -11.5°  157.3°  145.0°  -36.4° -163.4°  104.3°   12.9° -154.5° -117.0° -122.6°   25.7° -148.2°  -79.1° -118.1°   79.7°   26.0°   52.2° -117.2°  158.6°  -76.3°   94.3°  -16.6°   H24                  
H25     -65.9°  101.7°  -61.3°  -62.2°  111.4°  -78.6°   82.1°  105.1°  -82.7° -102.2°  -69.1°  111.7°  -86.1°   48.6°  -57.7°  111.9°   79.0° -116.7°  -74.0°  -62.6°  -63.1°   87.6°  117.3°  101.5°   H25           
H26      90.3° -106.6°   89.2°   86.5° -100.0°   82.8°   73.5°  -95.6°  -82.9°  -83.1°   81.4°  -84.7°  -82.7° -156.3° -123.1°   55.2° -128.8°   66.8° -110.2°  -96.7° -142.0°  -71.9°  -89.9° -103.4°  148.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2c5eb_ :    (ILE30)  (SER355)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2c54b_ :    (LYS29)  (SER355)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2c5ab_ :    (ILE30)  (SER355)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2c5ea1 :    (ILE30)  (SER355)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |GDP-mannose-3', 5'-epimerase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2c59b_ :    (ILE30)  (SER355)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2c59a1 :    (ILE30)  (SER355)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |GDP-mannose-3', 5'-epimerase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2