Protein Concepts Dictionary

Tableau information

Concept source:  d4gxxa_  amino acid (a.a.) range (ASP24)(ILE297)

nSSEs in this Concept: 26

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHEHEHEHEEEEHEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP24)   (VAL29) E1
	   (ASN33)   (THR37) E2
	   (THR37)   (GLY49) E3
	   (ILE56)   (GLY62) E4
	   (ASN65)   (LEU71) H5
	   (ASP77)   (ALA82) H6
	   (TYR86)   (THR90) E7
	   (THR90)   (GLY95) H8
	   (PRO99)  (ASP104) E9
	  (ASP104)  (SER113) H10
	  (SER116)  (GLU122) E11
	  (GLU131)  (THR136) H12
	  (SER145)  (ASN150) E13
	  (ASN150)  (LYS156) E14
	  (LYS163)  (VAL169) E15
	  (LYS174)  (PRO185) E16
	  (GLY188)  (LEU194) H17
	  (ALA198)  (VAL204) E18
	  (LYS208)  (ALA218) E19
	  (ALA227)  (LEU236) E20
	  (THR242)  (THR248) E21
	  (ASN250)  (ARG262) E22
	  (SER264)  (THR269) E23
	  (LYS280)  (PRO284) E24
	  (GLY286)  (SER290) E25
	  (PRO293)  (ILE297) E26

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                                    
E2      126.0°   E2                                                                                                                                                                             
E3      104.5° -111.0°   E3                                                                                                                                                                      
E4       79.9° -153.7°  -51.2°   E4                                                                                                                                                               
H5     -111.4°   69.9°   47.9°   98.6°   H5                                                                                                                                                        
H6      -85.0°   42.0°  121.1° -159.6°  -74.1°   H6                                                                                                                                                 
E7       92.2° -138.6°  -67.0°  -24.7°  114.0°  171.9°   E7                                                                                                                                          
H8      -73.8°  112.6°   38.7°   67.3°   45.6°  -95.3°   91.2°   H8                                                                                                                                   
E9      -71.0°   55.3°  138.4° -150.9°   93.9°   20.9° -151.5°  105.2°   E9                                                                                                                            
H10    -125.2°  -11.0°  119.6°  153.5°   80.7°   45.6° -132.9°  123.6°   54.6°   H10                                                                                                                    
E11      99.8° -107.6°  -10.8°   58.4°  -40.3° -111.4°   76.5°   29.4°  127.9°  117.4°   E11                                                                                                             
H12      79.1° -115.6° -117.6°  -69.3° -163.0°  121.3°  -50.6°  131.8° -102.4° -104.7° -126.7°   H12                                                                                                      
E13     -77.2°   48.9°  131.4° -156.6°   85.4°   11.9° -160.3° -101.4°    9.0°   49.8°  121.2°  110.5°   E13                                                                                               
E14      73.6°  131.9°  -30.9°  -44.4°  -62.0° -117.7°  -68.5°   22.9°  124.7°  142.7°   27.9°  110.9° -122.5°   E14                                                                                        
E15    -103.1°   32.5°  143.5° -159.0°   99.5°   39.3°  134.9°  133.7°  -37.2°   24.7°  139.2°  -90.7°  -36.6°  156.5°   E15                                                                                 
E16      75.9° -156.9°  -50.3°   -5.2°  -96.9° -154.4°  -29.6°  -63.2°  146.9° -158.2°  -56.6°   72.0° -151.9°  -40.4° -162.7°   E16                                                                          
H17    -131.1°  -33.5°   78.6°  128.1°  -37.1°  -55.3°  130.7°  -82.1°  -75.5°   43.9°   74.2°  143.5°  -66.7°  -98.8°   65.3°  128.5°   H17                                                                   
E18     -96.1°   34.7°  143.3° -165.0°   96.3°   30.5° -143.0°  125.7°  -27.9°   29.6°  136.6°  -95.8°   27.0°  148.3°   -9.6° -166.4°   65.0°   E18                                                            
E19      92.7° -141.0°  -54.7°   15.5° -102.2° -174.5°   12.7°  -79.2°  160.6° -138.5°  -64.0°   62.9°  169.1°  -56.8°  146.2°  -20.7°  123.9°  155.0°   E19                                                     
E20     -90.5°   35.5°  127.2° -168.8°   79.3°    9.7° -164.1°  104.5°  -21.0°   37.4°  118.3° -114.9°   13.4°  127.1°  -29.7°  163.6°  -55.2°   21.2° -175.6°   E20                                              
E21      84.2° -146.3°  -39.0°   12.4°  -86.2° -152.2°   34.3°  -57.0°  153.4° -150.5°  -46.0°   81.5°  155.1°  -34.4°  168.2°   11.7° -116.9° -177.2°  -22.3°  161.5°   E21                                       
E22    -101.2°   36.2°  147.2° -155.7°  103.4°   41.7°  132.1° -136.7°  -37.5°   27.9°  143.2°  -87.0°   37.9°  159.4°   -3.9°  159.0°   69.2°  -11.2°  143.8°  -32.2°  166.2°   E22                                
E23      95.9° -134.3°  -68.5°  -28.7°  114.6°  169.9°   -4.4°  -94.5° -151.5°  128.5°  -78.3°  -49.4° -159.9°  -71.9°  131.3°  -33.7°  128.4° -139.7°   15.4° -160.9°  -37.6°  128.7°   E23                         
E24      75.1° -158.2°  -62.4°  -11.2°  109.7° -159.8°   20.4°  -76.0° -144.0°  153.2°   69.5°   58.7° -151.8°  -53.4° -149.3°   13.4°  138.7° -153.9°   17.7° -165.0°   23.6° -145.7°   24.7°   E24                  
E25     -84.3°   47.2°  152.8°  155.3° -104.9°   32.9°  139.3° -126.0°  -21.3°  -42.0° -144.1°   89.2°   24.7°  146.0°  -18.9°  154.8°  -76.4°  -12.6°  151.9°  -25.8°  166.3°  -17.7°  137.1°  144.3°   E25           
E26     101.6° -131.9°  -41.7°  -21.8°   88.4°  162.5°  -25.7°  -71.4° -172.6°  132.8°  -51.7°  -76.1° -172.7°  -50.6°  149.2°  -25.7°  110.1°  158.7°  -14.4°  165.3°  -19.7°  148.4°  -26.8°  -29.4°  162.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4gxxe_ :    (THR23)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/brevig mission/1/1918(h1n1)) [TaxId: 88776]
 d4gxxc_ :    (ASP24)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/brevig mission/1/1918(h1n1)) [TaxId: 88776]
 d1ruzh_ :    (ASP18)  (ILE298)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d1rv0h_ :    (ASP18)  (ILE298)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4gxxa_ :    (ASP24)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/brevig mission/1/1918(h1n1)) [TaxId: 88776]
 d3lzfa_ :    (THR23)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.19