Protein Concepts Dictionary

Tableau information

Concept source:  d3unta_  amino acid (a.a.) range (ARG13)(CYS281)

nSSEs in this Concept: 26

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEHHHEHEEEHEHHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG13)   (ILE18) E1
	   (ALA19)   (GLY23) E2
	   (LYS24)   (LYS33) E3
	   (GLY35)   (PRO40) E4
	   (PRO40)   (ALA48) E5
	   (PRO56)   (THR62) H6
	   (ASP65)   (ASN70) E7
	   (THR71)   (ARG77) H8
	   (ALA80)   (GLY87) H9
	   (GLY88)   (GLY94) H10
	   (ARG97)  (SER103) E11
	  (GLY104)  (SER110) H12
	  (LEU114)  (SER118) E13
	  (GLY121)  (LYS125) E14
	  (SER131)  (SER136) E15
	  (SER136)  (GLY148) H16
	  (ASP150)  (ALA154) E17
	  (THR164)  (ARG189) H18
	  (ARG189)  (ASN195) H19
	  (ASN195)  (GLY204) E20
	  (GLU208)  (GLY222) H21
	  (GLY225)  (GLY230) E22
	  (GLU239)  (LEU251) H23
	  (LYS255)  (LEU259) E24
	  (LYS264)  (GLY275) H25
	  (ASP277)  (CYS281) E26

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                                    
E2      -46.9°   E2                                                                                                                                                                             
E3      160.1° -152.6°   E3                                                                                                                                                                      
E4      -26.8°   20.2°  171.9°   E4                                                                                                                                                               
E5     -140.6° -104.3°   51.5° -120.4°   E5                                                                                                                                                        
H6       26.4°   61.8° -143.0°   45.1°  165.5°   H6                                                                                                                                                 
E7     -115.8°  -69.2°   83.5°  -89.1°  -42.7°  127.1°   E7                                                                                                                                          
H8      157.1°  127.3°  -29.0°  143.1°   23.1° -170.8°   61.9°   H8                                                                                                                                   
H9      102.9°  149.5°  -57.8°  129.6°  103.9°  -89.1°  141.3°   81.6°   H9                                                                                                                            
H10      79.1°   96.3°  -91.3°   87.7°   78.7°  -98.0°  105.9°   79.9°   78.1°   H10                                                                                                                    
E11     -93.4°  -47.3°  106.4°  -67.3°  -70.0°  100.1°  -27.4°  -88.7° -158.7°  119.0°   E11                                                                                                             
H12      85.4°   51.8° -107.7°   64.4°  -56.4°  109.1°  -43.7°  -78.7°  144.5°   69.6°  -49.4°   H12                                                                                                      
E13     -84.7°  -90.7°   95.8°  -89.1°  127.7°  -60.0°  103.9°  118.2°  -81.2° -150.0°  -86.8° -134.2°   E13                                                                                               
E14     102.6°   93.3°  -77.8°   96.8°  -45.1°  127.4°   71.8°  -54.5°   98.4°   35.6°   91.3°   46.3°  172.5°   E14                                                                                        
E15     -66.6°  -83.6°  110.1°  -76.2°  147.2°  -41.0° -117.7°  135.9°   79.0° -132.8°  -95.3° -134.4°  -19.6°  167.7°   E15                                                                                 
H16      96.6°  136.9°  -64.5°  119.7°   92.0°  -96.2°  134.5°   75.7°   30.6°   47.7°  160.7°  115.0° -110.5°   70.4° -103.9°   H16                                                                          
E17     -79.8°  -36.8°  119.7°  -55.2°  -86.6°   83.7°  -43.9° -105.0° -156.9°  124.6°  -16.6°   58.0°  -76.2°  103.4°  -81.2°  172.2°   E17                                                                   
H18    -130.3° -171.1°   31.5° -156.5°   82.1° -112.2°  113.7°   59.1°  -28.2°  -91.0°  132.3°  136.3°   80.4°  -95.6°   87.7°  -47.5°  139.6°   H18                                                            
H19      29.4°   76.1°  130.7°  -55.9°  145.4°  -32.4° -143.7°  142.1°   74.1°   67.0° -122.9°  105.0°  -86.6°  100.5°  -67.2°   68.6° -108.8° -102.2°   H19                                                     
E20     -53.5°   -6.7° -146.1°   26.8°  -99.2°   67.2°  -62.8° -122.0°  155.8°   99.7°  -40.6°   49.0°  -90.5°   92.7°  -85.6°  142.6°  -30.8° -169.3°  -82.8°   E20                                              
H21    -132.8° -161.0°   32.4° -155.5°   83.8° -110.7°  109.2°   61.3°  -35.3° -102.2°  123.7°  140.1°   71.0° -104.3°   80.7°  -58.3°  129.1°  -11.3° -107.1°  158.1°   H21                                       
E22      73.0°   35.5° -122.4°   49.5°  -70.9°   94.6°  -47.6°  -93.8°  156.4°   78.4°  -42.6°   16.4° -120.7°   61.2° -118.2°  125.9°  -46.5°  152.4°   97.0°  -32.7°  154.1°   E22                                
H23    -113.5° -127.7°   60.6° -125.5°  105.7°  -87.2°  109.2°   87.4°  -53.2° -131.0°  107.7°  152.9°   37.4° -137.5°   49.6°  -83.3°  104.4°  -43.6° -100.2°  126.5°  -33.7°  150.1°   H23                         
E24      80.6°   58.0° -107.8°   65.2°  -60.0°  106.6°  -58.0°   79.6°  130.8°   54.1°  -64.9°  -15.7° -147.0°   35.6° -140.9°  100.4°  -72.2°  130.9°   94.6°  -57.1°  138.4°  -26.5°  165.1°   E24                  
H25     -84.1°  -94.5°   94.4°  -91.1°  130.5°  -58.6°  109.4° -118.7°  -75.7° -144.6°   92.7°  139.8°    5.9° -172.0°   17.6° -104.8°   81.9°  -76.6°  -83.2°   94.8°  -67.8°  125.7°  -34.6°  151.8°   H25           
E26     109.0°   83.9°  -78.7°   94.1°  -32.4°  135.3°  -50.6°   50.4°  115.3°   55.9°  -71.0°  -32.2° -154.1°   21.2° -165.6°   90.1°  -84.6°  104.5°  116.3°  -81.2°  110.1°  -48.6°  137.5°  -29.2°  159.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ozma_ :    (ARG13)  (CYS281)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d1wkfa_ :    (PHE14)  (CYS281)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d1wkea_ :    (PHE14)  (CYS281)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d4ippa_ :    (ARG13)  (VAL282)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 264203]
 d1wkda_ :    (ARG13)  (CYS281)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d1enua_ :    (ARG13)  (CYS281)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d3unta_ :    (ARG13)  (CYS281)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
 d4gd0a_ :    (ARG13)  (CYS281)   [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1