Tableau information
Concept source: d1eqbb_ amino acid (a.a.) range (PRO41)(TYR413)
nSSEs in this Concept: 25
String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHEHEHEHEHHHEHEEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO41) (ASN53) H1
(CYS68) (LEU85) H2
(ASP89) (GLN94) E3
(SER97) (LEU110) H4
(ASP114) (GLY118) E5
(ASN134) (LEU139) H6
(VAL143) (ILE147) E7
(ASP154) (HIS165) H8
(LYS168) (GLY173) E9
(ASP182) (GLY194) H10
(ALA195) (MET201) E11
(ALA205) (GLY211) H12
(HIS221) (THR226) E13
(THR226) (ALA232) H14
(GLY236) (LYS242) E15
(SER245) (GLN261) H16
(LEU265) (GLU281) H17
(GLU281) (GLY306) H18
(HIS317) (LEU323) E19
(THR329) (ASN341) H20
(THR343) (SER348) E21
(GLY361) (PRO367) E22
(PRO367) (GLY373) H23
(LYS375) (SER392) H24
(GLU396) (TYR413) H25
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -146.1° H2
E3 -65.7° 131.7° E3
H4 65.7° -81.2° 119.7° H4
E5 -155.0° 58.8° -96.0° 138.9° E5
H6 62.3° -83.8° 105.8° -16.6° -142.2° H6
E7 -160.7° 52.7° -105.3° 130.7° -9.3° -136.5° E7
H8 25.7° -120.8° 79.0° -43.5° 172.6° 37.0° 173.5° H8
E9 -129.2° 84.6° -77.7° 162.4° -25.8° -167.0° -32.8° 153.4° E9
H10 -45.6° -100.7° 93.3° -26.5° 158.3° 16.9° 153.4° -20.1° 170.8° H10
E11 -111.2° 102.5° -62.6° 172.5° -43.8° 168.3° -51.1° 135.1° -18.3° 154.2° E11
H12 112.4° 68.0° -149.7° 82.3° 74.4° 98.5° 66.2° -112.6° 82.8° -106.1° -93.0° H12
E13 -96.4° 114.2° -39.5° 159.1° -60.4° 144.9° -69.1° 116.3° -38.5° 132.6° -23.4° -116.0° E13
H14 156.1° 54.5° -111.4° -127.3° 17.3° -136.4° 9.5° -169.3° 35.2° -152.8° 53.0° -57.2° 73.4° H14
E15 97.4° -58.1° 160.4° -40.9° 103.0° -55.6° 93.8° -81.7° 121.8° -67.3° 136.0° 44.2° 159.4° 88.0° E15
H16 -70.9° 128.4° -5.5° 124.9° -90.5° 110.6° -99.8° 84.5° -72.4° 98.5° -57.8° -147.2° -34.5° -105.9° 165.8° H16
H17 153.3° 34.4° 138.8° -98.2° 43.0° -108.1° 33.8° -141.3° 64.3° -123.9° 81.9° -41.9° 102.3° 29.1° -60.0° 133.3° H17
H18 -119.9° -56.0° 77.0° -98.8° -68.2° -86.8° -71.5° 105.2° 81.7° 95.1° 88.7° -122.9° 80.3° 80.4° -105.6° 74.9° -82.3° H18
E19 -102.7° -73.9° 60.9° -98.5° -80.7° -83.5° -85.9° 92.1° 87.6° 86.8° 88.9° -141.4° 74.0° 95.2° -117.3° 59.8° 100.6° 18.5° E19
H20 -102.1° 109.6° -78.7° 144.9° 55.9° 158.0° 58.8° -127.4° 34.3° -145.6° 27.6° 72.2° -45.7° 55.2° 116.0° -75.3° 78.6° 115.1° 116.5° H20
E21 80.6° -67.2° 105.1° -33.8° -122.1° -22.4° -118.6° 55.1° -144.8° 36.3° -153.7° -104.3° 137.1° -121.7° -60.6° 108.3° -97.8° -65.3° -65.2° 176.1° E21
E22 90.7° 103.6° -112.4° 101.6° 80.5° 117.1° 76.8° -106.4° 71.6° -113.8° -71.3° 38.4° -88.8° 68.0° 75.8° -111.4° 71.0° 148.3° 159.1° -44.0° 133.7° E22
H23 -108.2° 98.3° -98.0° 129.7° 55.4° 145.9° 54.7° -130.3° 42.5° -142.1° -43.7° 52.7° -64.5° 47.9° 96.6° -94.7° 64.6° 122.7° 130.0° 19.5° -156.9° -29.1° H23
H24 -85.3° -89.5° 49.7° -93.2° -95.7° -76.8° -101.9° 77.0° 97.1° 75.7° 93.3° -157.4° 73.7° 111.4° -122.6° 50.3° -118.1° -35.8° -17.5° 119.4° -63.4° 161.5° 137.0° H24
H25 -77.0° 109.5° -114.3° 86.6° 97.1° 101.3° 92.7° -89.9° 88.2° -96.8° -85.9° 41.6° -100.3° 83.5° 68.2° -115.1° 81.0° 163.0° -174.3° -58.3° 120.1° 17.0° 45.7° -160.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yjya1 : (ARG37) (THR404) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Bacillus stearothermophilus [TaxId: 1422]
d1dfoa_ : (PRO41) (TYR413) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Escherichia coli [TaxId: 562]
d1dfob_ : (PRO41) (TYR413) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Escherichia coli [TaxId: 562]
d1yjsa1 : (ARG37) (THR404) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Bacillus stearothermophilus [TaxId: 1422]
d1kkja_ : (ARG37) (LEU403) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Bacillus stearothermophilus [TaxId: 1422]
d1eqba_ : (PRO41) (TYR413) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Escherichia coli [TaxId: 562]
d1eqbb_ : (PRO41) (TYR413) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67