Protein Concepts Dictionary

Tableau information

Concept source:  d3pn8a_  amino acid (a.a.) range (SER31)(ALA386)

nSSEs in this Concept: 25

String of secondary struct.elems. (SSEs) defining this concept: HEEHEHHEHEHHHEEHHHEEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER31)   (MSE36) H1
	   (THR37)   (HIS41) E2
	   (GLY42)   (THR48) E3
	   (TYR69)   (GLY80) H4
	   (LYS82)   (SER87) E5
	   (ALA89)   (PHE94) H6
	  (GLU104)  (LYS119) H7
	  (GLU123)  (SER129) E8
	  (VAL149)  (ARG163) H9
	  (LYS169)  (PHE174) E10
	  (GLU176)  (ASN182) H11
	  (ASP186)  (GLY194) H12
	  (ASP202)  (ASN229) H13
	  (ASN231)  (MSE237) E14
	  (ALA239)  (PRO245) E15
	  (PRO250)  (VAL271) H16
	  (GLU277)  (ALA287) H17
	  (THR293)  (GLU302) H18
	  (ASP306)  (TYR312) E19
	  (MSE314)  (ALA320) E20
	  (ASP335)  (TYR341) E21
	  (GLY355)  (TYR367) H22
	  (PRO370)  (GLU375) E23
	  (ASN376)  (ILE381) E24
	  (ILE381)  (ALA386) E25

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                             
E2       68.1°   E2                                                                                                                                                                      
E3      117.6° -170.7°   E3                                                                                                                                                               
H4       99.9°   33.2° -142.5°   H4                                                                                                                                                        
E5       74.8°  119.8°  -58.0°  142.2°   E5                                                                                                                                                 
H6     -126.0°  165.1°   -8.6° -134.0°  -65.3°   H6                                                                                                                                          
H7       91.9°  -43.3°  139.3°  -28.2°  162.7° -132.0°   H7                                                                                                                                   
E8       71.7°  105.1°  -71.5°  126.5°  -15.8°  -77.9°  148.4°   E8                                                                                                                            
H9     -112.0°  -88.7°   95.3°  -67.1°  150.1°   89.5°  -45.5°  165.9°   H9                                                                                                                     
E10      53.8°   86.1°  -91.9°  113.2°  -33.9°  -98.8°  128.8°  -21.5°  165.8°   E10                                                                                                             
H11      46.4°   79.5°  -99.2°  108.6°  -41.3° -106.5°  121.4°  -29.9°  158.1°   -8.5°   H11                                                                                                      
H12     150.8° -135.4°   42.4° -102.2°   98.4°   34.0°  -98.6° -108.9°   60.9° -130.4° -138.7°   H12                                                                                               
H13    -141.2° -106.5°   73.8°  -75.8°  131.3°   66.2°  -65.9°  141.8°  -30.2°  163.0° -171.5°   33.2°   H13                                                                                        
E14      31.2°   65.4° -115.2°   97.6°  -58.5° -123.2°  104.5°  -48.6°  139.8°  -27.3°  -18.8° -156.8°  169.7°   E14                                                                                 
E15      67.7°   33.9° -139.3°   55.9°  -88.7° -141.1°   75.8°   73.1° -121.1°   57.4°   53.2° -141.3° -129.6°   47.0°   E15                                                                          
H16    -133.6° -147.6°   33.7° -115.9°   91.6°   27.4° -105.6°  105.1°  -62.1°  125.6°  132.7°   17.2°  -41.1°  146.6° -157.8°   H16                                                                   
H17      54.9°  105.4°  -74.6°  135.1°  -20.0°  -82.7°  144.4°  -20.8°  152.0°   22.3°   26.6° -116.6° -148.0°   40.6°   79.4° -107.0°   H17                                                            
H18     -96.3°  -60.0°  124.0°  -43.9° -169.5°  117.8°  -17.5° -164.2°   28.8° -142.9° -134.6°   86.6°   53.5° -116.2°  -93.2°   90.5°  151.0°   H18                                                     
E19      -9.3°  -64.1°  122.7°   94.1°  -83.8° -130.6°   83.4°  -81.0°  103.1°  -62.8°  -55.1°  148.8°  132.7°  -38.8°  -69.5°  132.7°   64.0°  -87.1°   E19                                              
E20      77.4°   71.8° -101.7°  -87.5°   54.7° -104.8° -112.3°   39.1° -153.8°   33.5°   36.0° -122.3° -139.5°   46.3°  -37.9°  129.8°   53.5° -129.7°   84.3°   E20                                       
E21     -81.8°  -49.6°  136.2°   43.4° -156.5°  131.2°   16.0° -149.6°   41.9° -128.0° -119.7°  101.6°   68.6° -101.1°   83.5° -103.9°  136.6°  -15.3°  -72.7°  121.4°   E21                                
H22     149.3°  115.5°  -55.7°  -93.0°   78.0°  -50.3° -111.5°   78.3°  -98.6°   95.5°  103.1°  -47.6°  -69.0°  119.8°   98.1°  -60.4°  -96.9° -111.9°  158.3°   75.5°  125.0°   H22                         
E23     -28.1°  -92.6°   94.9°  120.1°  -71.7°  102.2°  101.7°  -76.6°  100.3°  -66.8°  -62.3°  122.6°  122.4°  -53.9°  -95.7°  105.5°   55.8°   97.8°  -28.9°   98.0°  -87.0°  146.3°   E23                  
E24     -25.2°  -89.8°   97.6°  117.7°  -72.4°  105.1°  100.2°  -76.5°  101.1°  -65.7°  -60.8°  125.6°  124.2°  -51.7°  -92.9°  108.4°   55.9°   97.1°  -26.0°   96.2°  -85.9°  148.2°    3.0°   E24           
E25     -79.2°  -86.9°  101.2°   83.2° -130.5°  -99.9°   55.0° -141.0°   34.8° -131.5° -125.2°   84.6°   61.9°  109.9°  119.0°  -76.9° -120.4°   40.5°   71.1°  152.9°  -40.8° -130.2°  -65.7°   66.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4f66a_ :    (SER31)  (ALA386)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
 d4f79a_ :    (SER31)  (ASP393)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
 d3pn8b_ :    (SER31)  (ALA386)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
 d4gpnb_ :    (SER31)  (ALA386)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
 d3pn8a_ :    (SER31)  (ALA386)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1