Protein Concepts Dictionary

Tableau information

Concept source:  d1wzka3  amino acid (a.a.) range (ASP159)(ARG502)

nSSEs in this Concept: 25

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHHHEHHEHEHHHEHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP159)  (HIS164) E1
	  (LEU172)  (ARG178) H2
	  (LEU179)  (GLY186) H3
	  (THR188)  (PRO194) E4
	  (LEU219)  (GLY233) H5
	  (GLY233)  (ASN243) E6
	  (PHE249)  (GLN257) H7
	  (SER262)  (PHE268) H8
	  (GLU302)  (GLY318) H9
	  (ASP320)  (VAL326) E10
	  (VAL326)  (ASP331) H11
	  (HIS332)  (ASN346) H12
	  (ALA349)  (ILE355) E13
	  (ALA359)  (MET364) H14
	  (ASP369)  (TYR374) E15
	  (TYR374)  (THR386) H16
	  (HIS390)  (LEU404) H17
	  (GLU407)  (LEU413) H18
	  (LEU413)  (LEU417) E19
	  (ARG424)  (GLY430) H20
	  (GLU433)  (THR445) H21
	  (THR449)  (TYR453) E22
	  (ASN465)  (ARG470) H23
	  (ARG481)  (HIS495) H24
	  (LEU497)  (ARG502) H25

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                             
H2     -142.3°   H2                                                                                                                                                                      
H3     -102.4°  -49.2°   H3                                                                                                                                                               
E4       48.8°  167.4°  131.8°   E4                                                                                                                                                        
H5     -125.9°   22.1°  -27.1° -156.5°   H5                                                                                                                                                 
E6      -32.9°  157.0°  108.2°  -25.5° -135.1°   E6                                                                                                                                          
H7       39.8°  174.5°  128.0°   -9.0°  154.7°   19.8°   H7                                                                                                                                   
H8     -107.9°   58.7°   25.3° -116.5°   40.1°  -99.1° -116.6°   H8                                                                                                                            
H9      155.4°  -34.6°  -83.6°  140.1°  -56.5°  165.1°  147.1°  -87.9°   H9                                                                                                                     
E10     -59.0°  134.6°   94.9°  -39.0°  117.5°  -28.4°  -40.1°  -77.5°  145.1°   E10                                                                                                             
H11      23.4° -121.4°  -93.1°   70.7° -110.2°   56.1°   61.7°  107.9° -134.2°   80.7°   H11                                                                                                      
H12     127.6°  -47.3°  -91.8°  136.1°  -67.0°  153.7°  137.4° -105.9°  -27.8°  169.2°  107.4°   H12                                                                                               
E13     -77.2°  118.0°   86.5°  -53.3°  104.3°  -47.1°  -56.6°  -64.8°  127.3°  -18.7°  -97.9°  154.7°   E13                                                                                        
H14      91.8°  -64.0°  -83.2°  127.3°  -71.5°  124.3°  121.2°  107.5°  -64.9°  149.7°   69.3°  -39.7°  163.0°   H14                                                                                 
E15    -112.7°   93.8°   89.9°  -74.0°   91.9°  -80.2°  -81.3°  -64.9°   91.0°  -54.1° -134.8°  117.6°  -37.3° -155.5°   E15                                                                          
H16    -139.9°   65.5°   75.9° -102.1°   67.9° -108.5° -109.9°  -55.5°   64.7°  -81.0° -157.8°   92.4°  -62.7° -127.0°  -28.9°   H16                                                                   
H17      46.0° -110.9° -105.8°   81.4° -110.8°   76.8°   74.0°  127.8° -109.4°  104.6°   28.3°  -81.6°  123.1°  -48.1°  155.3° -173.8°   H17                                                            
H18     129.1°   88.1°  123.6°  -82.2°  104.5° -105.3°  -90.8° -106.1°   59.9°  -93.7°  143.3°   75.5°  -84.4°  112.6°  -53.1°  -50.7°  125.4°   H18                                                     
E19    -123.8°   91.6°  107.5°  -76.1°   99.2°  -92.0°  -85.0°  -84.6°   75.4°  -71.8° -146.7°   98.1°  -58.8°  137.6°  -25.3°  -32.3°  146.8°  -27.8°   E19                                              
H20    -105.5°   83.0°   60.8°   87.7°   71.3°   80.4°   91.5°  -35.6°  -98.4°   52.5° -119.7° -125.1°   34.9° -142.4°   31.4°  -38.1°  147.9°  -82.2°  -55.4°   H20                                       
H21      61.5°  -84.6°  -74.7°  107.9°  -79.5°   93.9°   99.2°   98.7°  -98.2°  115.1°   38.2°  -74.8°  128.5°  -35.2°  161.0°  147.4°  -32.1° -145.5° -172.8°  130.0°   H21                                
E22     104.3°  113.3°  137.9°  -56.5°  127.1°  -79.8°  -65.3° -114.0°   85.3°  -72.5°  122.7°   96.8°  -68.7°  127.3°  -49.8°  -62.7°  116.2°  -25.7°  -30.6°  -81.0° -147.2°   E22                         
H23     138.2°   44.6°   92.7° -135.2°   66.2° -158.4° -139.1°  102.3°   17.5° -158.5° -118.9°  -11.6°  143.2°  -51.3°  105.9°   81.4°  -92.5°   65.5°   86.7°  115.9°  -86.2°   88.5°   H23                  
H24      67.4°  -75.4°  -57.0°  116.2°  -65.4°   96.4°  107.2°   80.8°  -97.7°  110.7°  -46.2°  -80.1°  119.1°  -43.9°  144.2°  131.8°  -49.0° -155.6°  164.1°  112.8°  -17.9° -165.0°  -90.3°   H24           
H25     -17.4° -157.8°  111.3°   32.0° -137.7°   17.1°   23.2°  109.2° -163.0°   45.3°  -40.6° -138.6°   64.0°  107.4°   97.0°  125.5°   59.7° -113.9°  106.3°   96.3°   78.8°   88.4° -146.8°  -84.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wzla3 :   (ASP159)  (ARG502)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
 d1wzma3 :   (ALA131)  (ARG502)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
 d1jf5a3 :   (ASP159)  (ARG502)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
 d1wzka3 :   (ASP159)  (ARG502)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
 d1g1ya3 :   (ASP159)  (ARG502)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
 d1bvza3 :   (VAL132)  (ARG502)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1