Protein Concepts Dictionary

Tableau information

Concept source:  d2co0a_  amino acid (a.a.) range (VAL31)(ASN287)

nSSEs in this Concept: 25

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEEEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (VAL31)   (LEU37) E1
	   (MET38)   (GLY43) E2
	   (LYS46)   (ASN56) E3
	   (GLU58)   (SER64) E4
	   (LYS67)   (GLY73) E5
	   (GLU80)   (GLY85) E6
	   (LEU88)   (SER96) E7
	  (ASN100)  (ALA105) E8
	  (LYS109)  (ASP115) E9
	  (LEU122)  (GLY127) E10
	  (PHE133)  (PHE137) E11
	  (ASN142)  (SER148) E12
	  (GLU151)  (ASP157) E13
	  (LEU164)  (HIS170) E14
	  (SER175)  (PHE179) E15
	  (SER184)  (SER190) E16
	  (GLY193)  (ASP199) E17
	  (LEU206)  (ASP212) E18
	  (SER218)  (PHE222) E19
	  (LYS227)  (ALA232) E20
	  (ASN236)  (ASP242) E21
	  (LEU249)  (GLY254) E22
	  (ILE262)  (PHE266) E23
	  (LYS272)  (GLY277) E24
	  (VAL283)  (ASN287) E25

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                             
E2      -43.5°   E2                                                                                                                                                                      
E3      118.6°  122.5°   E3                                                                                                                                                               
E4      -68.2°  -44.5°  156.0°   E4                                                                                                                                                        
E5      110.1°  146.0°  -42.0°  161.4°   E5                                                                                                                                                 
E6      -81.3°  -38.2°  116.2°  -40.0°  158.0°   E6                                                                                                                                          
E7      126.3°  130.9°    9.0° -157.3°  -38.4°  119.7°   E7                                                                                                                                   
E8      -86.9°  -63.2°  149.0°  -20.0°  148.7°  -46.5°  144.6°   E8                                                                                                                            
E9       87.2°  115.2°  -38.7°  155.3°  -31.3°  137.4°  -42.6°  172.2°   E9                                                                                                                     
E10    -112.3°  -77.1°  119.9°  -44.8°  135.9°  -44.0°  115.8°  -29.2°  158.4°   E10                                                                                                             
E11     110.4°  115.7°   -8.4°  154.2°  -44.4°  114.6°  -17.3°  153.5°  -34.2°  125.2°   E11                                                                                                      
E12     -82.9°  -74.4°  158.3°  -31.4°  131.2°  -67.3°  149.7°  -21.9°  151.5°  -46.1°  166.7°   E12                                                                                               
E13      81.4°   93.1°  -37.5°  137.5°  -57.0°  108.7°  -45.9°  154.2°  -28.7°  141.3°  -29.1°  164.3°   E13                                                                                        
E14    -111.8° -105.2°  126.8°  -60.7°  105.4°  -86.4°  117.8°  -43.2°  135.5°  -46.9°  135.1°  -32.2°  161.7°   E14                                                                                 
E15     114.7°  115.0°   -7.6°  149.7°  -48.7°  109.8°  -16.0°  147.1°  -40.7°  118.7°   -6.5°  161.9°  -33.4°  132.4°   E15                                                                          
E16     -71.1°  -73.1°  164.3°  -36.7°  124.8°  -76.2°  155.8°  -35.0°  137.5°  -61.4°  169.1°  -15.5°  151.2°  -40.9°  171.8°   E16                                                                   
E17      98.8°   91.6°  -31.0°  129.3°  -69.1°   91.0°  -39.3°  136.0°  -50.3°  114.7°  -25.4°  157.9°  -27.1°  148.5°  -23.5°  164.7°   E17                                                            
E18     -92.9° -104.5°  132.9°  -65.5°   96.6° -101.7°  124.6°  -55.3°  119.9°  -70.1°  139.0°  -34.7°  147.8°  -26.3°  140.4°  -31.4°  163.9°   E18                                                     
E19     121.7°  123.7°    3.3°  154.2°  -43.2°  114.9°   -7.2°  145.9°  -41.8°  116.7°  -11.4°  155.3°  -40.5°  124.2°   -8.8°  163.0°  -32.1°  131.8°   E19                                              
E20     -52.9°  -65.5°  160.7°  -42.6°  120.8°  -81.2°  159.1°  -49.4°  122.8°  -78.1°  156.7°  -34.0°  131.9°  -59.0°  163.2°  -19.3°  151.4°  -42.6°  163.1°   E20                                       
E21     128.5°  108.8°  -28.4°  128.3°  -68.1°   90.0°  -29.8°  121.9°  -65.8°   93.8°  -31.6°  139.1°  -53.6°  118.2°  -25.1°  154.6°  -30.3°  138.4°  -26.1°  170.8°   E21                                
E22     -45.5°  -76.2°  136.4°  -65.9°   99.2° -102.0°  136.7°  -73.7°   98.5° -101.8°  132.7°  -56.2°  112.1°  -73.1°  139.2°  -40.7°  137.8°  -49.3°  139.1°  -24.4°  164.3°   E22                         
E23     130.2°  141.6°   19.1°  160.7°  -30.5°  128.2°   10.9°  142.8°  -43.2°  116.0°  -26.5°  141.6°  -53.3°  109.4°  -26.6°  145.3°  -50.0°  113.9°  -18.0°  149.5°  -38.7°  129.6°   E23                  
E24     -36.5°  -36.1°  152.8°  -32.7°  139.3°  -59.9°  161.6°  -50.5°  123.3°  -77.4°  144.4°  -48.7°  115.7°  -80.5°  146.7°  -41.0°  124.8°  -70.8°  155.3°  -29.5°  144.7°  -43.0°  166.5°   E24           
E25     164.8°  140.1°  -46.3°  125.7°  -59.0°  105.7°  -38.5°  107.7°  -78.5°   81.0°  -54.5°  112.1°  -83.6°   82.4°  -50.4°  123.3°  -68.0°   98.7°  -43.2°  140.6°  -39.9°  141.5°  -35.3°  158.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ovpb2 :  (ASN2401) (ASP2650)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |F-box/WD repeat-containing protein 7, FBXW7 |Human (Homo sapiens) [TaxId: 9606]
 d3a0fa2 :   (GLY460)  (ALA753)   [view usage] : b.69.13.0 |7-bladed beta-propeller |Oligoxyloglucan reducing end-specific cellobiohydrolase |automated matches |automated matches |Geotrichum sp. [TaxId: 203496]
 d2co0c_ :    (VAL31)  (ASN287)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3n0da_ :    (GLU29)  (SER278)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bh6a_ :   (GLY293)  (LYS543)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1b9xa_ :    (ARG42)  (ASP298)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
 d2h6ka_ :    (VAL31)  (SER278)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2h9la_ :    (PRO30)  (SER278)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bh6e_ :   (GLY293)  (LYS543)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3u5gg_ :     (ASN4)  (ASP266)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
 d2h68a_ :    (VAL31)  (ASN287)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bh6h_ :   (GLY293)  (LYS543)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3krwb_ :    (GLY41)  (ASP298)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
 d2g99a_ :    (VAL31)  (ASN287)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1a0rb_ :    (ARG42)  (VAL296)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
 d1nr0a1 :    (SER40)  (GLU312)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d3ah8b_ :    (GLY41)  (ASP298)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
 d4bh6g_ :   (GLY293)  (LYS543)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2co0a_ :    (VAL31)  (ASN287)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2h13a_ :    (LYS32)  (SER278)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2g9aa_ :    (VAL31)  (SER278)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ymua1 :    (THR39)  (ASN290)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Nostoc punctiforme [TaxId: 272131]
 d4gm9b_ :    (LYS32)  (ASN287)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ggca_ :   (GLY214)  (ARG471)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3j3ag_ :     (THR2)  (ASP260)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Guanine nucleotide-binding protein subunit beta-2-like 1 (GNB2L1 or RACK1) |Human (Homo sapiens) [TaxId: 9606]
 d4bh6d_ :   (GLY293)  (LYS543)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1gg2b_ :    (GLY41)  (ASP298)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
 d3emha_ :    (PRO33)  (SER278)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3n0ea_ :    (GLU80)  (SER332)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2h68b_ :    (VAL31)  (SER278)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gmba_ :    (VAL31)  (ASN287)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3mxxa_ :    (GLU29)  (ASN287)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ggaa_ :   (GLY214)  (ARG471)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ymua2 :   (THR326)  (ASN577)   [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Nostoc punctiforme [TaxId: 272131]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.69,     i.1