Protein Concepts Dictionary

Tableau information

Concept source:  d3bx2a_  amino acid (a.a.) range (SER567)(LEU867)

nSSEs in this Concept: 24

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER567)  (LYS573) H1
	  (ASP574)  (ILE587) H2
	  (GLY589)  (THR600) H3
	  (THR604)  (ASP610) H4
	  (GLY613)  (GLU623) H5
	  (THR626)  (SER636) H6
	  (PHE640)  (ASN646) H7
	  (ASN646)  (CYS659) H8
	  (ASP663)  (THR677) H9
	  (THR677)  (ASP683) H10
	  (ASN687)  (LEU697) H11
	  (LYS698)  (CYS713) H12
	  (CYS713)  (HIS719) H13
	  (HIS719)  (ASP731) H14
	  (THR734)  (ALA747) H15
	  (LEU748)  (ASP755) H16
	  (ASN759)  (ASN773) H17
	  (TYR777)  (ALA789) H18
	  (ALA789)  (HIS795) H19
	  (SER799)  (THR808) H20
	  (SER812)  (GLY824) H21
	  (GLY824)  (ASP834) H22
	  (GLY837)  (GLN851) H23
	  (ASN852)  (LEU867) H24

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                      
H2     -127.7°   H2                                                                                                                                                               
H3      -81.6° -140.0°   H3                                                                                                                                                        
H4       23.5° -110.6°  103.9°   H4                                                                                                                                                 
H5      133.2°   10.6° -129.4° -119.0°   H5                                                                                                                                          
H6      -58.5° -150.5°   23.5°  -81.5° -141.3°   H6                                                                                                                                   
H7       37.8° -106.6°  112.1°   16.7° -116.6°   92.1°   H7                                                                                                                            
H8      129.8°    8.7° -131.8°  115.6°   -3.5° -142.1° -113.5°   H8                                                                                                                     
H9      -41.9° -148.7°   40.7°  -65.2° -143.5°   17.2°  -77.4° -142.5°   H9                                                                                                              
H10      45.9° -111.8°  108.2°  -29.5° -122.3°   92.0°  -14.6° -119.9°   80.1°   H10                                                                                                      
H11     122.9°   -6.2° -139.4°  107.3°  -11.7° -146.3°  105.1°   -8.5° -142.7° -111.8°   H11                                                                                               
H12     -38.9° -144.4°   44.9°  -62.3° -140.2°   21.5°  -75.4° -138.9°    5.0°  -79.4° -138.3°   H12                                                                                        
H13      56.7° -108.1°  111.3°   40.4° -118.6°   98.4°  -24.6° -116.6°   88.5°   11.2° -109.3°   88.4°   H13                                                                                 
H14     123.5°   -4.8° -140.6°  107.4°  -12.0° -148.1°  104.6°   -9.0° -144.4°  110.9°   -1.8° -140.0° -108.1°   H14                                                                          
H15     -34.2° -146.5°   48.3°  -57.6°  143.6°   24.8°  -70.3° -141.9°    7.7°  -74.0° -140.3°    5.4°  -83.0° -141.9°   H15                                                                   
H16      66.0° -117.1°   98.8°  -55.6° -126.6°   92.0°  -41.7° -125.8°   87.0°  -27.1° -120.1°   88.6°  -18.9° -118.6°   83.6°   H16                                                            
H17     114.1°  -16.7° -156.1°   94.9°  -27.0° -157.8°   89.9°  -24.5° -146.6°   95.4°  -16.7° -141.6°   92.5°  -15.6° -141.1° -104.0°   H17                                                     
H18     -20.0° -142.3°   61.7°  -43.2° -143.9°   38.5°  -56.0° -141.2°   22.0°  -60.7° -136.5°   19.5°  -70.4° -137.6°   14.5°  -74.0° -131.8°   H18                                              
H19     -89.3° -118.3°   84.1°  -84.4° -123.4°   88.9°  -71.6° -124.7°   92.7°  -57.0° -123.8°   96.4°  -48.5° -122.0°   93.0°  -29.9° -112.7°   89.5°   H19                                       
H20     105.6°  -23.2° -157.2°   87.4°  -32.4° -150.6°   84.2°  -29.3° -137.8°   91.5°  -20.8° -132.7°   90.2°  -20.4° -132.1°  103.9°    9.1° -122.8° -117.1°   H20                                
H21     -35.2°  138.4°   51.0°  -58.5°  135.2°   28.0°  -72.8°  133.6°  -12.0°  -78.4°  132.2°   -7.0°  -88.1°  133.8°   -8.4°  -90.6°  134.6°  -17.7° -101.3° -125.8°   H21                         
H22      94.5° -113.3°   86.8°  -88.4° -118.0°   93.3°  -74.8° -119.4°   97.9°  -60.2° -118.9°  101.7°  -51.0° -117.1°   98.4°  -33.1° -108.6°   95.1°    5.5° -113.6°  106.8°   H22                  
H23     105.0°  -23.1° -154.2°   87.7°  -31.6° -147.6°   85.4°  -28.3° -135.4°   93.3°  -19.9° -130.4°   92.6°  -19.7° -130.0°  106.8°   11.1° -121.5°  120.4°    3.3° -123.5° -116.9°   H23           
H24     -37.6° -163.8°   54.7°  -53.2° -170.6°   38.6°  -57.7° -167.3°   32.0°  -54.2° -160.1°   34.3°  -59.9° -160.4°   30.1°  -55.3° -147.4°   27.3°  -63.5° -140.6°   38.2°  -69.0° -140.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1m8wb_ :   (ILE853) (ILE1148)   [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |Pumilio 1 |Human (Homo sapiens) [TaxId: 9606]
 d3gvoa_ :   (ILE731) (ARG1025)   [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3bx3a_ :   (SER567)  (LEU867)   [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3bx2b_ :   (SER570)  (LEU867)   [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3bwta_ :   (ILE568)  (LEU867)   [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3bx2a_ :   (SER567)  (LEU867)   [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3h3dx_ :    (ILE25)  (LYS308)   [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118