Protein Concepts Dictionary

Tableau information

Concept source:  d1mmfa_  amino acid (a.a.) range (THR77)(LEU395)

nSSEs in this Concept: 24

String of secondary struct.elems. (SSEs) defining this concept: HHHHHEHEHEHEEHHEHHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR77)   (LEU83) H1
	   (VAL86)   (LEU92) H2
	   (SER98)  (ILE109) H3
	  (THR110)  (GLN120) H4
	  (VAL123)  (ARG134) H5
	  (THR138)  (LYS149) E6
	  (PRO152)  (GLY166) H7
	  (SER168)  (VAL174) E8
	  (ALA177)  (GLY194) H9
	  (VAL198)  (VAL204) E10
	  (GLU206)  (GLY216) H11
	  (SER219)  (THR223) E12
	  (VAL224)  (GLY228) E13
	  (THR229)  (ASP237) H14
	  (THR239)  (GLY254) H15
	  (LYS256)  (GLY262) E16
	  (GLY264)  (GLY270) H17
	  (LEU278)  (GLY292) H18
	  (GLN294)  (ALA300) E19
	  (ILE304)  (VAL310) H20
	  (SER312)  (ASP328) H21
	  (GLU330)  (ASN335) E22
	  (SER342)  (GLY357) H23
	  (PHE385)  (LEU395) H24

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                      
H2       88.3°   H2                                                                                                                                                               
H3     -105.0° -151.3°   H3                                                                                                                                                        
H4       25.0°  -65.1°  130.0°   H4                                                                                                                                                 
H5      149.8°   62.4° -104.5°  124.9°   H5                                                                                                                                          
E6      -90.8°  -96.8°   58.5° -102.2°   99.2°   E6                                                                                                                                   
H7       73.3°  -75.7°  132.2°   60.3°  -91.4°  162.4°   H7                                                                                                                            
E8      -92.7° -121.3°   34.7° -112.2°  108.2°  -24.6°  158.3°   E8                                                                                                                     
H9       79.8°   37.5° -168.2°   55.9°  -72.4°  132.9°  -38.2°  157.0°   H9                                                                                                              
E10     -91.4° -145.3°   16.3° -115.7°  116.6°  -48.5°  137.0°  -24.0°  170.9°   E10                                                                                                      
H11     116.0°   30.5° -137.1°   91.2°  -33.7°  107.3°  -74.3°  127.3°  -43.0°  145.5°   H11                                                                                               
E12     -58.8° -146.8°   50.7°  -82.9°  150.8°  -81.2°   96.4°  -62.0°  128.0°  -43.7° -170.6°   E12                                                                                        
E13     -64.0° -145.1°   61.9°  -83.1°  138.5° -104.0°   76.2°  -82.8°  112.5°  -61.0° -148.7°  -23.4°   E13                                                                                 
H14     115.4°   56.6°  -94.8°  105.9°  -55.5°   50.2° -130.0°   70.8°  -92.7°   93.0°  -57.3°  131.4°  153.5°   H14                                                                          
H15     109.6°   22.0° -140.0°   85.5°  -40.5°  101.2°  -77.9°  123.1°  -42.9°  144.4°    9.5° -168.3° -154.1°   52.4°   H15                                                                   
E16     -42.9° -130.0°   63.3°  -67.7°  167.3°  -77.7°   94.8°  -64.2°  118.7°  -52.2°  158.9°  -17.1°  -34.3°  125.9°  151.9°   E16                                                            
H17     -89.6° -126.0°  -31.8° -110.5° -112.8°   29.3°  152.7°   -5.7°  160.0°  -19.3°  133.0°  -56.3°  -77.1°   76.4°  128.8°   59.1°   H17                                                     
H18     150.9°   66.3° -104.0°  126.0°    7.4°  105.3°  -86.4°  112.0°  -71.4°  117.5°  -36.4°  146.4°  131.6°  -62.8°  -44.3°  163.5°  116.3°   H18                                              
E19     -31.8° -107.2°   76.4°  -54.6° -160.1°  -63.9°  102.7°  -61.1°  110.5°  -61.2°  137.7°  -42.2°  -60.0°  104.6°  128.6°  -26.2°   57.8°  167.4°   E19                                       
H20     -38.3° -112.4°   92.8°  -51.4°  145.3° -115.5°   55.6° -103.2°   84.4°   87.3° -127.1°   43.7°   33.0°  153.7° -126.9°   39.2°   97.9° -138.8°  -53.1°   H20                                
H21     145.4°   77.6° -102.2°  124.9°   27.4°  121.9°  -72.6°  121.7°  -69.7°  118.1°  -47.6°  131.4°  112.7°  -82.9°  -56.9°  146.8°  124.2°  -20.1°  172.5°  120.0°   H21                         
E22     -37.0°  -91.7°   84.8°  -52.4° -141.8°  -53.8°  109.9°  -59.9°  104.8°  -68.5°  121.3°  -60.3°  -78.9°   87.1°  111.8°  -44.9°   58.6°  149.0°  -18.9°  -68.5° -168.2°   E22                  
H23     128.2°   76.6° -111.7°  110.3°  -42.0°  139.5°  -55.0°  137.4°  -58.2°  127.9°  -50.1°  125.4°  103.3°  -96.8°  -59.4°  136.7° -138.9°  -35.1°  156.5°  103.7°  -17.7° -162.5°   H23           
H24      78.3°  -84.9°  122.3°   68.5°  -91.3°  169.0°  -10.5°  152.3°  -47.4°  128.9°  -79.5°   91.4°   69.7° -136.7°  -84.4°   92.8°  146.8°  -85.4°  105.2°   54.3°  -69.1°  115.3°  -51.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1mmfa_ :    (THR77)  (LEU395)   [view usage] : c.1.19.3 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Diol dehydratase, alpha subunit |Diol dehydratase, alpha subunit |Klebsiella pneumoniae [TaxId: 573]
 d1iwpa_ :    (THR77)  (LEU395)   [view usage] : c.1.19.3 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Diol dehydratase, alpha subunit |Diol dehydratase, alpha subunit |Klebsiella pneumoniae [TaxId: 573]
 d1dioa_ :    (ALA76)  (LEU394)   [view usage] : c.1.19.3 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Diol dehydratase, alpha subunit |Diol dehydratase, alpha subunit |Klebsiella oxytoca [TaxId: 571]
 d3auja_ :    (ALA76)  (LEU394)   [view usage] : c.1.19.3 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Diol dehydratase, alpha subunit |automated matches |Klebsiella oxytoca [TaxId: 571]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1