Protein Concepts Dictionary

Tableau information

Concept source:  d1qo5k_  amino acid (a.a.) range (THR8)(ALA338)

nSSEs in this Concept: 24

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHHEEEHEHHEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR8)   (ALA24) H1
	   (GLY26)   (ALA32) E2
	   (SER35)   (LYS47) H3
	   (THR51)   (PHE63) H4
	   (ASP66)   (SER72) H5
	   (GLY74)   (PHE79) E6
	   (PHE79)   (GLN85) H7
	   (LEU92)  (GLY101) H8
	  (VAL103)  (LYS107) E9
	  (GLY111)  (GLY117) E10
	  (GLU121)  (LEU127) E11
	  (SER131)  (GLY141) H12
	  (ASP143)  (ALA154) E13
	  (ALA154)  (SER159) H14
	  (SER159)  (GLY181) H15
	  (VAL183)  (GLU189) E16
	  (ASP197)  (HIS220) H17
	  (THR226)  (ASN231) E18
	  (THR244)  (VAL260) H19
	  (PRO265)  (SER271) E20
	  (SER275)  (LEU288) H21
	  (LEU297)  (ARG303) E22
	  (ARG303)  (TRP313) H23
	  (LYS320)  (ALA338) H24

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                      
E2       91.1°   E2                                                                                                                                                               
H3        5.9°  -90.5°   H3                                                                                                                                                        
H4       84.0° -163.4°   83.0°   H4                                                                                                                                                 
H5      113.5° -113.1°  119.0°   83.3°   H5                                                                                                                                          
E6     -101.1°  -17.3° -101.9° -174.6°   96.1°   E6                                                                                                                                   
H7       89.1°   96.0°  -83.4°  -68.1° -141.7°  110.0°   H7                                                                                                                            
H8       84.2°  173.1°   84.4°   10.7°  -73.5° -169.6°  -78.8°   H8                                                                                                                     
E9      -96.0°  -42.5°   99.4°  153.7°   72.6°  -28.3° -138.1°  143.0°   E9                                                                                                              
E10    -102.6°  -85.9°  108.4°  110.6°   30.3°  -70.2°  168.1° -100.0°   43.6°   E10                                                                                                      
E11     122.3°   88.1° -116.4°  -81.2° -119.6°   94.5°  -33.9°  -90.0°  119.6°  134.8°   E11                                                                                               
H12      64.3°  113.1°  -59.4°  -50.5° -133.7°  130.2°   30.9°  -60.2°  150.9° -156.0°   63.3°   H12                                                                                        
E13     -68.6°  -79.9°   74.2°  112.7°   57.6°  -71.2°  157.1°  103.0°  -44.9°  -34.7° -164.2°  131.1°   E13                                                                                 
H14    -150.8°  106.7° -146.4°  -72.3°  -81.1°  102.3°  -66.6°  -75.7°  112.8°  101.6°  -38.6°  -87.1° -136.2°   H14                                                                          
H15     109.6°  102.2° -104.1°  -64.9° -122.3°  111.3°  -21.7°  -74.7°  137.7°  146.4°   18.4°  -46.7° -177.4°  -44.9°   H15                                                                   
E16     -58.0°  -75.2°   63.4°  114.7°   69.7°  -69.9°  145.1°  106.3°  -47.2°  -46.7°  163.3°  121.9°  -12.3° -148.3°  166.8°   E16                                                            
H17     155.6°   89.6° -149.8°  -88.4°  -88.5°   86.2°  -66.6°  -92.6°  100.9°  101.7°  -33.4°  -93.1°  135.3°   17.1°  -46.7°  144.9°   H17                                                     
E18      38.0°  -73.3°   42.9°  110.7°   89.6°  -74.6°  123.5°  105.6°  -60.1°  -68.3°  150.1°  102.2°  -33.7° -169.9°  145.2°  -21.6°  160.4°   E18                                              
H19    -175.1°   93.3° -174.7°  -92.4°  -62.7°   82.6°  -92.6°  -91.6°   85.8°   75.6°  -60.1° -115.6°  110.0°  -28.5°  -71.5°  121.2°  -26.8°  142.0°   H19                                       
E20      44.9°  -49.1°   46.4°  128.8°  111.6°  -56.4°  106.2°  127.7°  -55.5°  -83.9°  123.5°   97.5°  -54.3°  155.1°  126.0°  -42.9°  138.1°  -28.3°  138.5°   E20                                
H21    -118.1°  148.2° -119.9°  -44.1°   45.8°  132.7°  -96.7°  -38.2°  116.7°   76.1°  -86.4°  -92.1°   98.4°  -53.4°  -80.7°  108.5°  -69.2°  121.6°  -57.2°  149.8°   H21                         
E22      70.3°  -22.3°  -68.9°  145.1° -128.0°  -37.8°   87.8°  151.4°  -55.8°  -98.0°   92.8°   96.0°  -80.0°  121.9°  101.3°  -71.3°  105.3°  -61.4°  114.4°  -33.5°  170.5°   E22                  
H23      50.8°  -56.7°  -46.5°  109.0°  156.6°  -73.5°   61.1°  116.4°  -90.6° -128.4°   82.7°   60.4°  -99.0°  121.2°   81.1°  -86.9°  111.2°  -67.6°  133.8°  -45.2° -152.5°  -36.2°   H23           
H24    -111.5°  138.6°  115.4°  -57.4°   26.5°  121.3° -117.6°  -48.3°   99.0°   56.3° -106.1° -107.9°   77.2°  -69.8° -101.9°   87.8°  -83.1°  103.3°  -63.6°  130.4°  -21.3°  154.3°  161.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fbaa_ :     (SER8)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1qo5a_ :     (THR8)  (TRP313)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), liver isozyme [TaxId: 9606]
 d1fdja_ :  (THR1008) (GLY1340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), liver isozyme [TaxId: 9986]
 d1qo5b_ :     (THR8)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), liver isozyme [TaxId: 9606]
 d1qo5c_ :     (THR8)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), liver isozyme [TaxId: 9606]
 d1qo5h_ :     (THR8)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), liver isozyme [TaxId: 9606]
 d6alda_ :     (THR8)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d1adoa_ :     (THR8)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d1qo5k_ :     (THR8)  (ALA338)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), liver isozyme [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1